Citrobacter portucalensis: FOB25_04205
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Entry
FOB25_04205 CDS
T06238
Symbol
phrB
Name
(GenBank) deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
cpot
Citrobacter portucalensis
Brite
KEGG Orthology (KO) [BR:
cpot00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cpot03400
]
FOB25_04205 (phrB)
Enzymes [BR:
cpot01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
FOB25_04205 (phrB)
DNA repair and recombination proteins [BR:
cpot03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
FOB25_04205 (phrB)
Prokaryotic type
FOB25_04205 (phrB)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
QET55679
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All DBs
Position
complement(857873..859291)
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AA seq
472 aa
AA seq
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MTTHLVWFRRDLRLHDNLALAAACRDRSAHVLALYISTPEQWKAHDMAPRQAALVNAQLN
ALQTALAEKGIPLLFHEVGDFATSVETVKNVCVQHGVSRIFYNYQYEINERQRDAAVEKS
LPQVVCEGFDDSVILPPGAVMTGNHEMYKVFTPFKNAWLKRIKDGIPECVSAPKVRESGA
LDSPLTSIALSYPQQDFDTQKFPAEEKLAIAQLRHFCQQAAGEYEQLRDFPAIDGTSRLS
ASLATGGLSPRQCLNRLLVEQPQALEDGAGSVWLNELIWREFYRHLMTYHPALCRYQPFI
RWTERVQWQNNPTHFQAWKTGNTGYPIVDAAMRQLNATGWMHNRLRMITASFLVKDLLID
WRKGEQYFMSQLIDGDLAANNGGWQWAASTGTDAAPYFRIFNPTTQGEKFDRDGEFIRQW
LPELRDVPGKAIHEPWSWAEKAQVTLSYPRPIVDHKQARLATLAAYEAARKG
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
atgaccacgcatctggtctggtttcggcgtgatttacgcctgcatgacaatctcgcgctg
gcggcggcttgtcgggatcgttctgcacatgtactcgcgctctatatctccacgcctgaa
cagtggaaggcgcatgatatggccccacgtcaggcggcattggttaacgcgcagttgaac
gcgttgcaaacggcgctggcagaaaagggcatcccgcttctgtttcatgaagtcggtgat
tttgcgaccagtgtggaaaccgtcaaaaacgtctgcgtacagcatggcgtcagtcgaata
ttttataactatcaatatgaaataaacgaacgccagcgtgatgctgccgtcgaaaagtca
ttacctcaggtggtgtgcgaagggtttgacgacagcgtgatcctgcctccgggggcggtc
atgaccggtaatcacgagatgtataaagtctttacgccgtttaaaaatgcctggctgaag
cggataaaagacgggatcccggaatgtgtcagtgcgccgaaggtgagagaaagcggtgct
cttgactctccattaacatccatcgcgctgagctacccgcagcaggattttgatacgcag
aaatttccggcagaagaaaaattggccatcgcgcagttacgccatttttgccagcaggcc
gccggagaatatgaacaactgcgtgactttccggcgattgacggaaccagtcgattatcc
gcgagcctggcgacaggaggactatcaccgcgccagtgcctgaatcgactgctcgtggag
cagccgcaggcgcttgaggatggggcaggcagcgtttggttgaatgagcttatctggcgt
gagttttatcgccacttgatgacttaccatccggcgctatgtcggtatcaaccttttatt
cgctggaccgaacgcgtgcaatggcagaataatccgacccatttccaggcctggaaaaca
gggaatacaggctaccccattgtggatgcggccatgcgtcagctcaacgccacgggctgg
atgcataatcgtttacgcatgattaccgccagttttttagtgaaagacctgctgatcgac
tggcgtaaaggcgaacaatatttcatgtcgcaactgatcgatggcgacctggcggccaat
aacggcggctggcagtgggcagcctcaaccggaactgacgccgcaccgtatttccgtatc
tttaaccccacgacgcagggcgaaaaattcgaccgtgacggtgagtttatccgccagtgg
ctgccggaactgcgcgacgtgccgggtaaagccattcatgaaccgtggtcgtgggctgaa
aaagcgcaggtaacactgagttatcctcgcccgattgtggatcataaacaggcaaggctg
gcgacgctggcggcatatgaggcggcacgtaagggataa
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