Citrobacter portucalensis: FOB25_04500
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Entry
FOB25_04500 CDS
T06238
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
cpot
Citrobacter portucalensis
Pathway
cpot03030
DNA replication
cpot03430
Mismatch repair
cpot03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cpot00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
FOB25_04500 (holA)
03430 Mismatch repair
FOB25_04500 (holA)
03440 Homologous recombination
FOB25_04500 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cpot03032
]
FOB25_04500 (holA)
03400 DNA repair and recombination proteins [BR:
cpot03400
]
FOB25_04500 (holA)
Enzymes [BR:
cpot01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
FOB25_04500 (holA)
DNA replication proteins [BR:
cpot03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
FOB25_04500 (holA)
DNA repair and recombination proteins [BR:
cpot03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
FOB25_04500 (holA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delt_C
DNA_pol3_delta
DNA_pol3_delta_C
Motif
Other DBs
NCBI-ProteinID:
QET55725
LinkDB
All DBs
Position
915532..916563
Genome browser
AA seq
343 aa
AA seq
DB search
MLKLYPEQLRAQLNEGLCAAYLLLGNDPLLLQESQDAIRQAAATQGFEEHHAFTLDNSTD
WGEIFSLCQAMSLFASRQTLLLQLPENGPNAAINEQLASLVTLLHDDLLLIVRGNKLTKA
QENAAWYTGLANNAVQVSCQTPEQAQLPRWVAARAKLNNLQLDDAANQLLCYCYEGNLLA
LAQALERLALLWPDGKLTLPRVEKAVNDAAHFTPFHWVDALLMGKSKRALHILQQLRLEG
SEPVILLRTIQRELLLLVNLKRQSAHTPLRTLFDKHRVWQNRRGMMGDALNRLNPAQLRQ
AVTLLTRTEITLKQDYGQSVWAELEGLSLLLCHKSLADVFIDG
NT seq
1032 nt
NT seq
+upstream
nt +downstream
nt
atgctcaagttgtaccctgaacaactccgcgcacagctcaatgaagggctgtgcgcggcg
tatttgctcttaggtaacgatcctctcttgttgcaggaaagccaggacgctatccgtcag
gctgccgccacacaagggttcgaagaacaccacgctttcaccctggacaatagcaccgac
tggggagagattttttcactctgccaggcaatgagcctgtttgccagccgtcaaacccta
cttttgcagttgcctgaaaatggccccaatgccgccattaacgaacagctcgcttcactc
gtcacactgctacatgacgacctgctgctgatcgttcgcggcaacaaactgactaaagcg
caggaaaacgccgcatggtataccggacttgccaataatgcggtacaggtaagctgccag
acgccggagcaagcacagcttcctcgttgggtcgccgccagagcgaagcttaacaatcta
caactggatgacgcagccaatcagctgttgtgctattgctatgaaggtaatctgttagcg
ctggcgcaagcgctggaacggctagcattgctttggcctgatggcaaactaacgctgcct
cgcgtggagaaagccgttaacgatgccgcgcactttaccccgttccattgggtggatgcg
ctgctgatgggcaaaagcaaacgcgcgctgcacattctgcaacagttacgcctggaaggc
agtgagccagttattttgttgcgtacgatacagcgcgaattactgctgttggtcaactta
aaacggcagtcagcccatacgcctttgcgcacgttgtttgataaacaccgggtgtggcaa
aatcgccggggtatgatgggagacgcgctaaaccggctgaatcctgcgcagttgcgtcag
gctgtaacgctgttaacgcgtactgaaattacgcttaaacaagactatggtcagtcagtg
tgggcggaacttgaggggctttccctgttgctctgccataaatcgctggccgatgttttt
attgatggttga
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