Citrobacter portucalensis: FOB25_05830
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Entry
FOB25_05830 CDS
T06238
Symbol
sbcC
Name
(GenBank) exonuclease subunit SbcC
KO
K03546
DNA repair protein SbcC/Rad50
Organism
cpot
Citrobacter portucalensis
Brite
KEGG Orthology (KO) [BR:
cpot00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cpot03400
]
FOB25_05830 (sbcC)
DNA repair and recombination proteins [BR:
cpot03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
FOB25_05830 (sbcC)
Archaeal homologous recombinant proteins
FOB25_05830 (sbcC)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
SMC_N
AAA_29
nSTAND3
nSTAND_NTPase5
ABC_tran
AAA_15
cobW
AAA_21
preATP-grasp_3
AAA_14
NTPase_1
AAA_22
Motif
Other DBs
NCBI-ProteinID:
QET55978
LinkDB
All DBs
Position
1206637..1209780
Genome browser
AA seq
1047 aa
AA seq
DB search
MKILSLRLKNLNSLKGEWKVDFTAEPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR
LNTVSQSQNDLMTRDTAECLAEVEFEVRGEAYRAFWSQNRARNQPEGNLQVPRVELARCA
DGKILADKVKDKLEMTAELTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEELTGTE
IYGQISAMVFEKHKSARTELEKLQAQASGVALLAPEQVQSLTESLQVLTDEEKQYLTSQQ
TQQQHLNWLIRQNELQTDINRHQQALQAALQAQEDAQPQLAALSLAQPARALRPHWERIQ
EQTATIERTRQKIQEVNTRLQSSLALRGRIRQQAHTQSTAILAEQQTLTNWLNEHDRFRL
WSSELAGWKALLAQQSDASAQLRQWQQLRENDTRKLDALQLPTLTLSPQEVTEAQAQHVQ
LRPLRQRLSNLHGQIAPKQKQLAQLRASLVQRQQELTQRNAVLAEKRQRYKDKNQQLADV
RLICEQEARIKDLESHRALLESGKPCPLCGSTTHPAIERYQTLELSVNQARREALEKEVK
TLADEGSTLRGQLEAITQQLQRDEHEAQRLSQEEQALTKEWLTVTASLNVSLQPQDEIAP
WLAAQEEYEQQLHQLSLRHTLQAQIAAHTEQITQLQQHIDQRQATLTSELDRHGLALPPE
DEVSSWLRERANEAQMWQQRQNELTELQARIAQLAPLLETLPESEALSEIIEDLSLENWR
QVHDDCLSLQGQWQTLQQQEAQDVQRAADIQAQFDAALQASIFDNRDAFIAALLDEETFN
RLEQLKQSLEVQQQQAQTLLNQAQQALATHQQQQPTGVDLTLTAQHLRDTLAQLTQLLRD
NTTRQGEIRQQLRQDAENRQQQQALMQEIDNVAQQVEDWGYLNALIGSKEGDKFRKFAQG
LTLDNLVWLANNQLTRLHGRYLLQRKASEALELEVVDTWQADAVRDTRTLSGGESFLVSL
ALALALSDLVSHKTRIDSLFLDEGFGTLDSETLDTALDALDALNASGKTIGVISHVEAMK
ERIPVQIKVKKINGLGYSKLDNTFRVE
NT seq
3144 nt
NT seq
+upstream
nt +downstream
nt
atgaaaattctcagcctgcgcctgaagaacctcaactccctgaagggagaatggaaagtc
gatttcacagcagaaccttttgccagcaacgggttgttcgccattaccgggccaacgggc
gcggggaaaaccaccctgctggacgcgatttgcctcgccctgtaccacgaaacaccgcgc
ctgaataccgtgtcacagtcgcaaaacgacctgatgactcgcgataccgcggagtgtctg
gccgaagttgagtttgaggtgcgcggcgaagcctaccgcgcattctggagccagaaccgg
gcgcgcaatcagcccgagggcaacctgcaggtcccgcgcgtagagctagcccgctgcgct
gacggtaaaatcctcgccgataaagtcaaagacaagctggagatgacagccgagcttacc
gggctggattacgggcgttttacccgttcgatgctactgtctcagggccagtttgccgcc
tttcttaatgccaaaccgaaagagcgcgccgagcttctggaggagttaactggtactgag
atctacggccaaatctccgccatggtgtttgaaaagcacaagtcggcgcgtacggagctg
gaaaaactgcaggcccaggccagcggcgtggcgctgttagcaccagagcaggtgcagtcc
ctgacggaaagtttgcaggtacttactgacgaagaaaaacaataccttaccagccaacaa
acccagcaacagcacctcaactggcttattcggcaaaatgagcttcagacggacataaac
cgccaccagcaggcattacaggcagcacttcaggcgcaagaagacgcgcagccgcagctg
gcagcgctgagcctggcgcagccggccagagcattgcgccctcactgggagcgaatccag
gaacaaacggctactatcgagcgtacgcgccagaagattcaggaagtgaatactcgctta
caaagcagcttagcgctgcgcgggcgtatccgtcagcaagcgcacacgcaatcgaccgcg
atactcgccgaacaacagacgttaaccaactggctgaacgaacatgaccgcttccgctta
tggagtagcgaactggcaggatggaaagcgctgctggcgcaacagtccgacgccagcgcc
cagctacgccagtggcagcagctgcgggagaacgacacacgtaaactcgatgcccttcag
cttcccacgttgaccctttcgccgcaggaagtgacagaagcgcaggcgcaacatgtgcag
cttcgtccactacgccagcgcctcagtaatctgcacgggcaaatcgccccgaagcaaaag
cagctggcacagctacgcgcttcactggtgcagcgccagcaagagctgacccagcgcaac
gcggtacttgccgagaaacgtcagcgctataaagataaaaatcagcaacttgccgatgtg
agactcatttgcgagcaggaagcccgcatcaaagatctggaaagccatcgggcattactg
gaatccggcaaaccttgtccgctttgtggctctaccacacatccggctatcgagcgttac
cagacgcttgagctgagcgtaaatcaggcacgacgtgaagcgctggaaaaagaggtcaaa
acgctggccgatgagggttcaaccctgcgcgggcagcttgaggcgataacgcagcaactt
cagcgcgatgaacatgaagcacagaggctttctcaggaggagcaagcacttactaaagag
tggttgaccgttaccgccagcctcaacgtatcgctacaaccgcaggatgaaattgccccg
tggctagccgctcaggaagagtacgaacaacagcttcaccagttaagcttgcgtcatacc
ctgcaggcgcaaatcgccgcgcataccgaacagattactcaactccaacagcatattgac
cagcgccaggcaacgttaacctcagagctggaccgtcatggtctggcccttccgcccgag
gatgaagtctcctcatggctaagagaacgggcgaacgaagcgcaaatgtggcaacagcgc
cagaatgaactgactgagttacaggcccggattgcccagcttgcgccgctgctggaaacg
ctgccagaatctgaggcgctttctgaaatcattgaggatctgtcgctggaaaactggcgg
caggtgcacgacgattgcctctctttacagggacagtggcaaaccttgcagcagcaggaa
gcacaggacgttcagcgcgccgcagacattcaggcgcagtttgatgccgcattgcaggcc
agcatctttgacaaccgtgacgcctttattgctgccctgctggatgaagagaccttcaac
cgtcttgagcagttgaaacaatcgctggaagtccagcaacaacaggcacaaacgctgctt
aatcaggcccagcaggcgctggcgactcatcaacagcagcaaccaaccggggtggatctc
acgctcacggcacaacatcttcgcgacacgctggcgcagctcacccaactgctgcgggat
aacaccactcgtcagggagagattcgccagcaactcaggcaggatgctgaaaaccgccag
caacagcaggcgctgatgcaggagattgataacgtcgcgcaacaggtcgaagactggggc
tatctgaatgcgctgatcggctcgaaagagggagataagttccgcaaatttgcccaggga
ctgacgctggataacctggtctggcttgccaacaaccagttaacccgtctacacggtcgc
tatctgttgcagcgcaaggccagcgaagcgctggagctggaggtggtcgatacctggcaa
gccgatgcggtgcgtgacacgcgtacgctctccggaggtgagagcttcctggtgagtctg
gcgctggcgctggcattgtccgatctggtcagccacaaaacacgaattgactccctgttc
ctcgacgaaggcttcggcacgctggacagcgaaacgctggataccgcgctggacgcactg
gatgcactcaacgctagcggtaaaaccattggcgtgatcagccacgtcgaagcaatgaaa
gaacgcattccggtgcaaatcaaagtgaaaaaaatcaacgggctgggctacagcaaactc
gacaacactttcagagtggaatga
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