Citrobacter portucalensis: FOB25_08990
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Entry
FOB25_08990 CDS
T06238
Symbol
mscM
Name
(GenBank) miniconductance mechanosensitive channel MscM
KO
K22051
miniconductance mechanosensitive channel
Organism
cpot
Citrobacter portucalensis
Brite
KEGG Orthology (KO) [BR:
cpot00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cpot02000
]
FOB25_08990 (mscM)
Transporters [BR:
cpot02000
]
Other transporters
Pores ion channels [TC:
1
]
FOB25_08990 (mscM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MscS_TM
MscS_porin
MS_channel_2nd
MS_channel_3rd
MS_channel_1st
Motif
Other DBs
NCBI-ProteinID:
QET56564
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Position
1896559..1899873
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AA seq
1104 aa
AA seq
DB search
MRLIITFLMAWCLSLGAYAATAPDAKQLTQELEQAKAAKPAQPETVEALQSALNALEERK
GSLERAQQYQQVIDNFPKLSATLRAQLSNLRDEPRNVPTGLTTDALNQEILQVSSQLLEK
SRQAQQEQDRAREIADSLSQLPQQQTDARRQLNELERRIGTANGNSAQNQAMQAESAKLK
AQVDELELAQLSANNRQELARMRSELAEKQSQQLDAYLQALRNQLNSQRQREAERALEST
ELLAENSAGLPEGIVDQFKVNRELSQALNQQAQRMDLVASQQRQAASQTLQVRQALNTLR
EQSQWLGVSNMLGEALRAQVSRLPEMPKPQQLDTEMAQLRVHRMRYEDLLNKQPQLRQIH
QADGQPLTAEQSSILNAQLRTQRELLNSLLQGGDTLILELTKLKVSNSQLEDALKEVNEA
THRYLFWTSDVSPISLSWPVDIVQDLRRLISLDTFNQLGKASIMMLTSKETLLPLFAALV
LVGFSLSSRKHFTRFLERSSARVGKVTQDHFWLTIRTVFWSILVASPLPVLWATLGYGLQ
EAWPYPLAVAIGDGVTATVPMLWAVMICATFARPNGLFIAHFGWPRNRVAKAMHYYLMSI
GLIVPLIMAVIMFDNLNDREFSASLGRLCFILICGALAVVTLSLKRAGIPLYLDKEGNSD
NMVNSMLWNMLMGAPLIAILAAAVGYLATSQALLARLETSVAIWFLLLVVYHVIRRWMLI
QRRRLAFDRAKHRRAEMLAQRARGEEEPPHSTSLEGAIDVDESEVDLDAISAQSLRLVRS
ILMLIALLSVIVLWSEIHSAFGFLENISLWDVTSTVQGVESLEPITLGAVLIAILVFIIT
TQLVRNLPALLELALLQHLDLTPGTGYAITTITKYLLMLIGGLVGFSMIGIEWSKLQWLV
AALGVGLGFGLQEIFANFISGLIILFEKPIRIGDTVTIRDLTGSVTKINTRATTISDWDR
KEIIVPNKAFITEQFINWSLSDSVTRVVLTIPAPSEANSEEVTQILLTAAQRCSLVIDNP
APEVFLVDLQQGIQIFELRIYAAEMGHRMPLRHEIHQLILAGFREHGIDMPFPPFQMRLE
SLGGKQTGRTLSSAGRGRRPAGSL
NT seq
3315 nt
NT seq
+upstream
nt +downstream
nt
gtgcgcctgattatcacttttctgatggcctggtgcctcagcctgggggcgtacgctgcg
acggcccccgatgccaaacaactcacccaggaactggagcaggcaaaagcggcaaaaccc
gctcagccagaaaccgtcgaggcgctccagtccgcgctgaatgcccttgaggagcgtaaa
ggctctctcgagcgcgcccaacaatatcagcaggttattgataacttccccaagctgtcc
gcaacgttacgcgcgcagcttagtaacctgcgtgatgaaccgcgcaatgtgccaaccgga
ctcactaccgatgcgttaaaccaggagatcctccaggttagcagccaactgctggaaaag
agtcgtcaagcccagcaggagcaggatcgcgcccgggaaatcgccgactcgttaagccag
cttcctcaacagcaaaccgatgcccgccgccagctcaatgagcttgagcgacgcattggt
acggccaacggcaattccgcgcagaatcaggcgatgcaggctgaatccgccaaacttaaa
gcccaggtcgatgaactggagctggcgcagctttccgccaataaccgtcaggaactggcg
cgtatgcgctccgaactggcggaaaaacagagtcaacaactcgacgcttacctgcaggct
ttgcgcaaccagcttaacagtcaacgtcagcgtgaagctgagcgagcgctggaaagcact
gaactgctggcggaaaacagcgcgggactgccggaaggcattgtcgaccagttcaaggta
aaccgcgagctgtctcaggccttaaaccagcaagcacagcgtatggacctggtcgcttcg
cagcagcgtcaggccgccagccaaacgctgcaggtgcgtcaggcattgaatacgctgcga
gagcagtctcagtggcttggggtttcaaatatgctgggagaagcgctgcgagcgcaggta
tcccgtctgccggaaatgcctaaacctcagcagttggataccgaaatggcgcagcttcgc
gtacaccgcatgcgctatgaggatctcctcaacaaacagccgcagctgcgtcaaattcat
caggccgatggacaaccgctgaccgctgaacagagcagcatcctcaacgcccagctacgc
acccagcgtgagttgctgaactcattgttacagggcggcgatacgctgatccttgagctg
accaagctcaaagtttccaacagccaactggaagatgcgctaaaagaggtcaatgaagcg
acgcaccgctacctgttctggacgtcagacgttagccctatctcgctctcctggcctgtc
gacatcgttcaggatctgcggcgtctgatctcattagatacgtttaatcagttgggcaaa
gccagcatcatgatgctgaccagcaaagaaacgctgctaccgctgttcgcggcgttggtg
ttagttggctttagcctctcttcgcgcaagcacttcacccgtttccttgaacgctcgtcc
gcgcgggtcgggaaagtcacccaggaccacttctggctgacaatacgcacggtattctgg
tcaatactcgtcgcttcaccattgccagtgctgtgggcaacgctcggttacggattgcag
gaagcctggccttatccgttggctgtcgcgatcggcgatggcgttaccgccacggtgccc
atgctgtgggcggtaatgatctgcgccacctttgcacgtcccaacggtctgttcattgcc
cactttggctggccgcggaaccgcgtcgcgaaagccatgcactattacctgatgagcatc
gggctgattgtcccgttgatcatggcggtgattatgtttgataacctcaatgaccgggaa
ttctccgcctcactggggcgtctgtgctttattctgatttgcggtgcgctggcggtcgta
accctgagcctgaaacgcgccgggataccgctgtacctcgataaagagggcaacagcgat
aacatggtcaacagcatgctgtggaatatgctgatgggtgcgccgctgattgccattctc
gccgcggcagtaggctacctcgccacgtcacaagccctgctggcacgtctggaaacgtct
gtagcgatttggttcttattactggtggtgtatcacgttatccgccgttggatgctgatt
cagcgtcgccgcctggcgtttgaccgcgccaagcatcgacgcgcagaaatgctggcgcag
cgcgcgcggggcgaagaagaaccaccgcattccaccagccttgaaggcgcgattgacgtt
gatgaaagcgaagtggatttggatgctatcagcgcgcaatcgctgcgcctggtgcgttct
atcctgatgcttatcgccctgctctcggtcattgtactgtggtcagaaattcattccgct
ttcggcttcctggaaaacatctcgttgtgggatgtcacctccacggttcagggcgtggaa
agcttagaaccgataacgctgggcgcggtgcttatcgcgattctggtatttatcatcacc
acccagttagtgcgcaacctacccgcactgctggagctggcactactgcaacatctggat
ttaacccccggcaccggttatgccatcaccaccatcaccaagtatctgctgatgctgatt
ggcggtctggttggcttctcgatgatcggtattgaatggtccaaactgcaatggctggtg
gcggctctcggtgtcggtctgggctttggtttgcaggagatcttcgccaactttatttcc
ggtctgattatcctgtttgaaaaaccaatccgcattggcgacacggtgacgattcgcgat
cttaccggtagcgtgacgaaaattaatacccgcgccaccactatcagcgactgggaccgc
aaagagatcatcgtgcccaacaaagcctttatcaccgaacagtttatcaactggtcgtta
tccgattcggtcacccgtgtggtgttaaccatcccggcaccgtcagaggcgaacagcgag
gaggttacgcagatcctgctgactgccgcgcagcgctgttcgttagttatcgataacccg
gcgccagaagtcttcctggttgacctgcaacaaggcattcaaatcttcgaactgcgtatt
tatgccgccgagatggggcatcgcatgccgctgcgccatgaaatccaccaactgattctg
gcaggcttccgcgagcacggtattgatatgccgttccctccgttccagatgcgtctggag
agcctcggcggtaagcaaacagggagaacattaagttctgcaggaagaggccgtcgcccg
gcagggagtttgtaa
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