Citrobacter portucalensis: FOB25_10905
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Entry
FOB25_10905 CDS
T06238
Symbol
recQ
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
cpot
Citrobacter portucalensis
Pathway
cpot03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cpot00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
FOB25_10905 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cpot03019
]
FOB25_10905 (recQ)
03400 DNA repair and recombination proteins [BR:
cpot03400
]
FOB25_10905 (recQ)
Enzymes [BR:
cpot01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
FOB25_10905 (recQ)
Messenger RNA biogenesis [BR:
cpot03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
FOB25_10905 (recQ)
DNA repair and recombination proteins [BR:
cpot03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
FOB25_10905 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
Helicase_C
HRDC
RecQ_Zn_bind
ResIII
Cas3-like_C_2
zf-CXXC
Motif
Other DBs
NCBI-ProteinID:
QET56907
LinkDB
All DBs
Position
complement(2311812..2313641)
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AA seq
609 aa
AA seq
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MAQAEVLNLEMGAKQVLQETFGYQQFRPGQEEIIDTVLSGRDCLVVMPTGGGKSLCYQIP
ALLLNGLTVVVSPLISLMKDQVDQLLANGVAAACLNSTQSREQQLEVMTGCRSGQIRLLY
IAPERLMLDNFLEHLAHWNPVLLAVDEAHCISQWGHDFRPEYAALGQLRQRFPTLPFVAL
TATADETTRLDIVRLLGLNDPLIQINSFDRPNIRYMLMEKFKPLDQLMRYVQEQRGKSGI
IYCNSRAKVEDTAARLQSRGISAGAYHAGLENAVRAEVQEKFQRDDLQIVVATVAFGMGI
NKPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAEAMLFYDPADMAWLRRCLEEKPAGQL
LDIERHKLNAMGAFAEAQTCRRLVLLNYFGEGRQEPCGNCDICLDPPKQYDGLMDARKAL
STIYRVNQRFGMGYVVEVLRGANNQRIRELAHDKLPVYGIGREQSHEHWVSVIRQLIHLG
LVTQNIAHHSALQLTEAARPVLRGDVALQLAVPRIVALKPRAMQKSFGGNYDRKLFAKLR
KLRKAIADEENIPPYVVFNDATLIEMAEQMPVSPSEMLSVNGVGMRKLERFGKEFMALIR
AHVDGDDEE
NT seq
1830 nt
NT seq
+upstream
nt +downstream
nt
gtggcgcaggcggaagtgttgaatctggaaatgggcgctaaacaggttttgcaggaaacc
tttggctaccaacagtttcgccccggtcaggaagaaatcattgataccgtgctctctggt
cgcgactgcctggtcgttatgccgaccggcggcggtaaatccctgtgctatcaaattccc
gcattattgctaaacggactcaccgttgttgtttccccgctgatttccctgatgaaagat
caggtcgatcaactgctggccaacggcgtggcggcggcgtgcctgaattctactcaaagt
cgtgaacagcagcttgaggtgatgacgggctgtcgcagcgggcagattcgcttactgtat
attgcgcccgaacgactgatgctggataacttccttgagcatctggcgcactggaatccg
gtgctgctggcggttgatgaagcacactgtatttcgcagtgggggcatgatttccgcccc
gagtacgctgcgctgggccagctgcgccagcgtttcccgacgctgccgtttgtggcgctg
accgcgaccgcggatgagacaacccggctggacattgtgcgtctgctgggactgaacgat
ccgttaattcaaatcaacagctttgaccgaccgaacattcgctacatgctgatggagaag
tttaagccgctcgatcagctgatgcgctacgtgcaagagcagcgcggtaagtctggcatt
atctattgtaacagtcgcgccaaagtcgaagacaccgccgcgcgtctgcaaagccgtggc
atcagcgccggggcttatcatgccgggctggaaaatgccgtacgcgccgaggtgcaggag
aaattccagcgtgatgacctgcaaatcgtagtggcgaccgtggcgttcggtatggggatc
aacaaacctaacgtacgcttcgtggtgcatttcgatattccgcgtaacatcgaatcctat
taccaggaaaccggccgcgccgggcgtgatggcctgccggcggaagcgatgctgttttac
gatccggctgatatggcatggctacgccgttgcctcgaagagaaacccgccgggcaactg
ctggatatcgaacgtcataagctcaatgcgatgggggcgtttgccgaggcgcagacctgt
cgtcgtctggtgttgctgaactattttggcgaagggcgccaggagccgtgtggcaactgc
gatatctgtctcgacccgccaaaacagtacgacggacttatggatgcgcgcaaagcgctg
tcgacgatttaccgtgttaaccaacgcttcggcatggggtacgtcgtggaagtgctgcgc
ggagcgaataaccagcgtattcgcgaactggctcatgacaaactgccggtctatggcatt
ggtcgcgagcaaagccacgaacactgggtgagcgttattcgccagcttattcacctgggc
ctggtgacgcagaatattgctcatcactccgcgttacagctaaccgaagccgcgcgtccg
gtgttgcgcggtgacgttgcgttacagcttgctgtaccacgtattgtggcgctgaaaccg
cgtgcgatgcagaaatccttcggtggtaactacgaccgcaaactgttcgccaaattgcgt
aagctgcgtaaagccattgccgacgaagagaacattccgccgtacgtggtgttcaacgac
gccacactgattgaaatggcagagcagatgccggtttcaccgagtgaaatgctaagcgtc
aacggtgtggggatgcgtaaacttgagcgtttcggtaaagagtttatggcgcttattcgc
gcacacgttgatggtgacgacgaagagtag
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