Citrobacter portucalensis: FOB25_16035
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Entry
FOB25_16035 CDS
T06238
Symbol
rppH
Name
(GenBank) RNA pyrophosphohydrolase
KO
K08311
putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
Organism
cpot
Citrobacter portucalensis
Pathway
cpot03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cpot00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
FOB25_16035 (rppH)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cpot03019
]
FOB25_16035 (rppH)
Messenger RNA biogenesis [BR:
cpot03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
FOB25_16035 (rppH)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NUDIX
NUDIX_4
Nudt16-like
Motif
Other DBs
NCBI-ProteinID:
QET57844
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All DBs
Position
3344698..3345228
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AA seq
176 aa
AA seq
DB search
MIDDDGYRPNVGIVICNRQGQVMWARRFGQHSWQFPQGGINAGETAEQAMYRELFEEVGL
SRKDVRILASTRNWLRYKLPKRLVRWDTKPVCIGQKQKWFLLQLVSSDAEINMQTSSTPE
FDGWRWVSYWYPVRQVVSFKRDVYRRVMKEFASVVMALQESTPKPQSAPAYRRKRG
NT seq
531 nt
NT seq
+upstream
nt +downstream
nt
gtgattgatgacgatggctaccgcccgaatgtagggatagtaatttgtaaccgccagggg
caggtcatgtgggcccggcgatttggtcagcactcctggcaattcccacaaggtgggatc
aacgcaggagagacagcagagcaggcgatgtaccgggaactctttgaagaagtgggtctc
agtcgtaaagatgtacggatccttgcttctactcgtaactggttgcgttacaagttaccg
aaacgtttggtgcgttgggacacgaagccggtttgtatcggccagaaacaaaaatggttt
cttctgcaattggtcagcagcgatgctgaaatcaatatgcaaaccagcagtacacctgag
ttcgacggctggcgctgggtgagttactggtatccggttcgacaggtggtgtcatttaaa
cgcgatgtctatcgcagggtgatgaaagaattcgcaagtgttgtcatggcgcttcaggag
agcactcctaaaccgcaaagcgcacctgcgtacagacgtaaaagaggttaa
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