Citrobacter portucalensis: FOB25_16075
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Entry
FOB25_16075 CDS
T06238
Symbol
recC
Name
(GenBank) exodeoxyribonuclease V subunit gamma
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
cpot
Citrobacter portucalensis
Pathway
cpot03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cpot00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
FOB25_16075 (recC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cpot03400
]
FOB25_16075 (recC)
Enzymes [BR:
cpot01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
FOB25_16075 (recC)
DNA repair and recombination proteins [BR:
cpot03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
FOB25_16075 (recC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
Motif
Other DBs
NCBI-ProteinID:
QET57852
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All DBs
Position
3351287..3354655
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AA seq
1122 aa
AA seq
DB search
MLRVYHSNRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLAQKFSIAANI
DFPLPASFIWDMFVRVLPDIPKESAFSKQSMSWKLMTLLPQLLDSDDFALLRHYLTDDTD
KRKLFQLSSRAADLFDQYLVYRPDWLTQWEAGRQVEGLGESQAWQAPLWKALVEYTAELG
QPRWHRANLYQRFIQTLENASECPQGLPSRVFICGISALPPVYLQALQALGKHIDIHLLF
TNPCRYYWGDIKDPAWLAKLMARQRRHSFEERHLPLFRDNQKAEGLFNSDGEQDVGNPML
ASWGKLGRDYIYLLSELENSQELDAFVDITPDNLLHNIQSDILELESNAVAGVTLEEYSR
SDNKRRLELNDTSVTFHVCHSPQREVEILHDRLLAMLEADPTLTPRDIIVMVADIDSYSP
FIQSVFGSAPAERYLPYAISDRRARQSHPVLQAFISLLSLPDSRFVSEDVLALLDVPVLA
ARFNIDEEGLRYLRLWVNESGIRWGIDDDNVRELELPPTGQHTWQFGLTRMLLGYAMESS
QGEWQSVLPYDESSGLIAELVGHLASLLMQLNLWRRGLAQERPLEEWLPVCREMLNDFFL
PDADTEAAMTLIEQQWQAIITEGLGAEYGDAIPLSLLRDELAQRLDQERISQRFLAGPVN
ICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPMRGDRSRRDDDRYLFLEAL
ISAQQTLYISYIGRSIQDNSERFPSVLVQELMDYIGQSHYLPGDESLTCDQSEARVKAHI
TRLHTRMPFDAQNYLPGEQQSYAREWLPAASLSGKAHTDFVQPLPFEMPETLTLETLQRF
WAHPVRAFFQMRLRVNFRSEESEIPDTEPFTLEGLTRYQLNQQLLNTLVEENDAERLFRR
FRAAGALPYGPFGEILWDTQRQEMQSLAERIIACRQPCQSMEIDLNCHGVQITGWLPQVQ
EDGLLRWRPSLISIAQGVQLWLEHLVYCASGGRGESRLFLRKDGEWRFPPLDAEQALLYL
SQLIEGYREGMSSPLLVLPESGGAWIKTCYDAANDAMLDNDATLQKARSKFLQAYEGNMM
VRGEGDDIWYQRLWRQLDADTQEAIVLQSQRYLLPIFRFNQS
NT seq
3369 nt
NT seq
+upstream
nt +downstream
nt
atgttaagggtctaccactccaaccgtctggatgtgctggaagcgttaatggaatttatc
gttgagcgcgagcggctggacgacccctttgaacctgagatgatcctggttcaaagtacc
ggtatggctcagtggctacaaatgactcttgcacagaagtttagtattgccgccaatatc
gattttccgctgcccgcgagttttatctgggatatgtttgtgcgcgtgctgccggatatc
ccgaaagagagtgcgttcagcaaacagagcatgagctggaagttgatgacgctgttgcca
caattgctggatagcgatgacttcgcattgctacgccactatctgacggacgacactgat
aaacgtaagctttttcagctttcctcgcgcgcggctgaccttttcgatcagtatttagtc
taccgccctgactggttgacccagtgggaagcggggcgacaggttgagggacttggcgag
tctcaggcctggcaggcaccgttgtggaaagcgctggtggaatacaccgcggaattgggc
caaccgcgctggcatcgtgccaatttataccaacgatttattcagaccctggaaaatgcg
tctgaatgtccgcaggggctgccttctcgcgtctttatttgcggaatttcggcgctaccg
ccggtttatttgcaggcattgcaggcgctgggtaagcacattgatattcatctgctattt
accaacccttgtcgctactattggggcgacattaaagatcctgcctggctggcgaagctg
atggctcgtcagcgtcggcacagctttgaagaacggcatctgccgctgtttcgtgataac
cagaaagccgaaggattatttaacagcgatggcgaacaggatgtgggcaacccgatgctg
gcctcgtggggcaagctggggcgtgattacatttatttgctttcggagctggaaaacagt
caggaactggatgcgtttgtcgatattacgcctgacaaccttttgcataatattcaatcg
gatattctggaacttgaaagtaatgccgtggcgggcgttacgctggaagaatattcccgt
agcgacaataaacgccggcttgagctgaacgacaccagtgtgactttccatgtctgccat
agcccacagcgcgaggtggaaattcttcatgaccggctgttggccatgctggaagcggac
ccaacgctgacgccgcgcgatattattgtgatggtggcggacatcgacagctacagccca
ttcattcagtcggtctttggtagcgcgccagccgagcgttacttaccttatgcaatatct
gaccgtcgggcacgccagtctcatcccgtcttacaggcctttatcagcctgctgtcgctg
ccggatagccgttttgtctcagaggatgtcctggcgttactggatgttcccgtgctggcg
gcgcgtttcaacattgatgaagaagggttgcgctatcttcgcttatgggtcaatgaatcc
gggattcgttggggaattgacgacgataacgtgcgtgaactggaacttccacctacaggt
cagcatacatggcaatttggtttaacgcgtatgctgctcggctacgcgatggaaagctcg
cagggcgagtggcaatcggtattgccttacgatgagtccagcggcctgattgccgagctg
gtagggcatctggcctcgttgctgatgcagcttaatctctggcgtagagggttagcgcag
gaacgtccgctggaagagtggctacccgtttgtcgggaaatgcttaatgatttcttccta
ccggacgcggacaccgaagcggcaatgacgctgattgaacagcagtggcaggccattatt
accgaaggtttaggggccgagtacggcgatgctataccgctctctctgttgcgtgatgag
ctagcccagcgccttgaccaggaacgcatcagccagcgcttcctggcggggcccgttaac
atttgtacgctgatgccgatgcgctccattccgttcaaagtggtgtgcctgctgggtatg
aacgatggggtttatccgcgtcagcttgcgccgctgggctttgatttaatgagccaaaaa
ccgatgcggggtgaccgcagtcgtcgcgatgatgaccgctatctgttcctcgaagcatta
atctcggcacagcagacgctctacatcagctacattggccgctctattcaggataacagc
gagcgcttcccgtcggtgctggtgcaagaactgatggactacattggacaaagccattat
ctgccgggcgatgaatcgttgacctgcgatcaaagcgaggcaagggtaaaagcgcatata
acccgtttgcatacccgtatgccctttgatgcacaaaactatttgccgggcgaacagcaa
agctatgcccgggaatggctgcctgcggcgagtctgtcaggaaaagcgcacacggatttt
gtgcagcctcttccctttgaaatgccagaaacgctaacgctggaaacgctgcagcgattt
tgggcacatccggtacgcgcctttttccagatgcgtttaagggtcaacttccgctctgaa
gagagtgagatcccggatacggaacctttcactcttgaagggttaacccgctaccagctt
aatcagcaattgcttaatacgctggttgaagagaacgatgctgaacgactgttccgccgt
tttcgtgcggcgggcgcgctaccctatgggccgtttggcgaaattctgtgggatacgcag
cgtcaggaaatgcagtcgctggctgaacgcattatcgcctgtcgtcagccctgtcagagc
atggaaatcgatcttaactgtcacggcgtgcaaatcaccggttggctgccgcaggtgcaa
gaggatggtttgttgcgctggcgcccatctttgataagcattgcgcagggtgtgcaactt
tggctggaacatcttgtctattgtgccagtggcggtaggggagagagccgattgttcctg
cgtaaagacggagaatggcgttttccgccgctggatgcagaacaggcgttgctgtacctg
tcgcaactcattgaggggtatcgggaaggcatgtcgtcaccgttgctggtattgcccgaa
agcggtggtgcatggataaaaacctgttatgacgccgcaaatgatgccatgttagataac
gatgcaacgttgcaaaaagcgcgcagtaagtttctgcaagcctatgaaggcaacatgatg
gtacgtggcgaaggtgatgatatctggtatcagcgtctttggcgtcaactggatgctgat
acgcaggaggctattgttttacagtcacagcgctatctgttaccgatttttcgctttaac
cagtcctga
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