Citrobacter portucalensis: FOB25_16385
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Entry
FOB25_16385 CDS
T06238
Symbol
truD
Name
(GenBank) tRNA pseudouridine(13) synthase TruD
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
cpot
Citrobacter portucalensis
Brite
KEGG Orthology (KO) [BR:
cpot00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cpot03016
]
FOB25_16385 (truD)
Enzymes [BR:
cpot01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
FOB25_16385 (truD)
Transfer RNA biogenesis [BR:
cpot03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
FOB25_16385 (truD)
Prokaryotic type
FOB25_16385 (truD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-ProteinID:
QET57909
LinkDB
All DBs
Position
3423737..3424786
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AA seq
349 aa
AA seq
DB search
MTAFEDLTYLHGKPQGHGVLKANPEDFVVVEDLGFEPDGEGEHILVRILKNDCNTRFVAD
ALAKFLKIHAREVSFAGQKDKHAVTEQWLCARVPGNAMPDLSKFELEGCKVLEYARHKRK
LRLGALKGNEFTLVLREVSQRNDVEARLQAISERGVPNYFGAQRFGIGGSNLQGALRWAQ
SDAPVRDRNKRSFWLSAARSALFNQIVSERLKKTDFNQVVDGDALQLSGRGSWFVATQEE
QTELQRRVDDKELMITAALPGSGEWGTQRDALAFEEAAIADETALQSLLLREKVDASRRA
MLLYPQQLSWNWWDDVTVELRFWLPAGSFATSVVRELINTMGDYAYIAE
NT seq
1050 nt
NT seq
+upstream
nt +downstream
nt
atgactgcgtttgaagatctgacgtatctccatggcaaaccacaaggccatggcgttctg
aaagcgaatccggaagactttgtcgtcgtcgaagatttaggcttcgaaccggatggcgaa
ggcgagcacattttggtgcgtatcctgaaaaacgactgtaatacccgttttgtggctgac
gcgctggcgaagttcctgaaaattcacgcccgtgaagtgagctttgctggccagaaagac
aagcatgcagtcacggaacagtggctgtgcgcgcgcgtgccgggcaatgcaatgcctgat
ttaagcaaatttgaactcgaaggctgtaaagtgctggagtacgcgcgccacaagcgtaag
ctgcgtttaggggcgctgaaaggtaacgaatttacgctggtgttgcgtgaagtgagccag
cgaaatgacgttgaagcgcgtttgcaggcgattagcgagcgcggcgtaccgaactatttt
ggcgctcagcgttttggtattggcggcagcaacctgcaaggggcgctgcgctgggcgcaa
agcgatgcgccggtgcgcgatcgcaataagcgcagtttttggttgtcggcggcccgtagc
gcgttgtttaatcagatagtcagtgaacgcttgaaaaaaacagactttaatcaagttgtt
gacggcgatgcgctacaattgtcgggacgcggaagttggtttgtcgccacgcaggaagaa
cagaccgaattacagcgtcgcgtcgatgataaagaattgatgattacagcggcattaccg
ggcagcggtgagtggggaactcagcgcgacgcgctggcgtttgaagaagccgctattgct
gatgaaaccgcgctgcagtcgctgttgttgcgcgagaaagtcgacgcatcgcgtcgtgct
atgttgctgtatccacaacaattaagctggaactggtgggatgacgtaaccgttgagtta
cgtttctggctaccggcaggtagcttcgccaccagtgttgtaagggaacttattaacaca
atgggtgattatgcgtatattgctgagtaa
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