Citrobacter portucalensis: FOB25_22760
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Entry
FOB25_22760 CDS
T06238
Symbol
dbpA
Name
(GenBank) ATP-dependent RNA helicase DbpA
KO
K05591
ATP-dependent RNA helicase DbpA [EC:
5.6.2.6
]
Organism
cpot
Citrobacter portucalensis
Brite
KEGG Orthology (KO) [BR:
cpot00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cpot03009
]
FOB25_22760 (dbpA)
Enzymes [BR:
cpot01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
FOB25_22760 (dbpA)
Ribosome biogenesis [BR:
cpot03009
]
Prokaryotic type
rRNA helicases
FOB25_22760 (dbpA)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
Cas3-like_C_2
Helicase_C_2
Motif
Other DBs
NCBI-ProteinID:
QET59085
LinkDB
All DBs
Position
4746763..4748136
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AA seq
457 aa
AA seq
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MTAFSTLNVLPAAQLENLNELGYLEMTPVQAAALPAILAGKDVRVQAKTGSGKTAAFGLG
LLQHIDAALFQTQSLVLCPTRELADQVAGELRRLARFLPNTKILALCGGQPFGAQRDSLQ
HAPHIIVATPGRLLDHLQKGTVSLDALNTLVMDEADRMLDMGFSDAIDDVIRFAPASRQT
LLFSATWPEAIAAISGRVQQNPLTIEIDTVDALPAIEQQFFETSSHGKIPLLQKLLSQHQ
PASCVVFCNTKKDCQAVCDALNAAGQSALSLHGDLEQRDRDQTLVRFANGSARVLVATDV
AARGLDIKSLELVVNFELAWDPEVHVHRIGRTARAGNSGLAISFCAPEEAQRANILSEML
QLKLNWLTAPANGSILPLEAEMATLCIDGGKKAKMRPGDVLGALTGDIGLDGADIGKIAV
HPAHVYVAVRQNIAHKAWKQLQNGKIKGKTCRVRLLK
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
gtgaccgctttttcaaccctgaatgttttacctgctgctcaactcgagaatcttaacgag
ctgggctatcttgaaatgacgcctgttcaggctgctgcgttaccggcaatcctggcgggt
aaagatgttcgcgtgcaggctaaaaccggcagtggcaaaacggctgcttttggtcttggg
ctattacagcatattgatgccgcgctgtttcagacgcagtctctggtactgtgcccaacg
cgcgagcttgccgaccaggtggcgggtgagctgcgtcgtttagcgcgcttcctgccaaac
accaagatcttagcgctgtgcggtgggcaaccttttggcgcacagcgtgactccctgcaa
catgcaccacatattattgttgccacaccgggtcgtttacttgaccacctgcaaaaaggc
accgtttctctggatgccctgaatacgctggttatggatgaagccgaccgcatgctggat
atgggctttagcgatgcgattgatgatgtcattcgctttgcgcctgcgtcacgtcagact
ttgctgttttccgcaacctggccggaagccattgctgctatcagtggccgggtacagcaa
aatccattaacgattgaaattgatacggtcgatgcgttaccggcgattgaacagcagttt
ttcgaaacctccagccacggaaaaattccgctgctgcaaaagctactcagccagcatcaa
cccgcatcgtgcgtggttttttgtaacaccaaaaaagattgtcaggccgtttgcgatgca
ctgaatgcggcagggcaaagcgcactgtcattacatggcgacctggaacagcgcgatcgc
gatcagacgctggttcgttttgccaacggtagcgcgcgcgtcctggtcgcaaccgatgtg
gccgcacgtggcctggatatcaaatcacttgagctggtagttaacttcgaactggcgtgg
gatccggaagtccacgtccatcgtatcggacgtaccgcgcgtgccggcaacagcggtctg
gcgattagcttctgtgcgccggaagaagcgcagcgtgccaacattctttctgaaatgctg
caactgaagctgaactggctaactgcgccagctaacggctcaatcctgccgctggaagca
gagatggcgacgttatgcattgatggtggtaaaaaagcgaaaatgcgtcctggtgatgtt
ctgggggctctgaccggtgatattggtctggatggcgctgatattggcaaaattgccgtt
catccggcacacgtctatgtcgccgttcgccagaacatagcgcacaaggcgtggaaacaa
ttgcaaaacggtaagatcaaaggcaagacttgccgggtccggttattgaaataa
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