Corynebacterium poyangense: GP475_03845
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Entry
GP475_03845 CDS
T08294
Name
(GenBank) RtcB family protein
KO
K14415
tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:
6.5.1.8
]
Organism
cpoy
Corynebacterium poyangense
Brite
KEGG Orthology (KO) [BR:
cpoy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cpoy03016
]
GP475_03845
Enzymes [BR:
cpoy01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.8 3'-phosphate/5'-hydroxy nucleic acid ligase
GP475_03845
Transfer RNA biogenesis [BR:
cpoy03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
GP475_03845
Prokaryotic type
tRNA splicing ligases
GP475_03845
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RtcB
Motif
Other DBs
NCBI-ProteinID:
QNQ89874
UniProt:
A0A7H0SMU9
LinkDB
All DBs
Position
complement(817291..818439)
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AA seq
382 aa
AA seq
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MEIFATKLDDNVLEQAKQLEAMPFIHPHVALMPDAHYGLGSSIGTVFGTLQAVIPSAVGV
DIGCGMIGVRTGFSASDLKGRNLEKLRSAIEATIPLSPGNYNSWQLRESADHRCRELHQL
ALDTEVDLSHSPKWRQQLGSLGGGNHFIELCLDETERVWMFLHSGSRGVGNKIARKHIAV
AQRLCAKWYIDLPHRDLAYLVEGTEEFDAYLRDLHWAQTFAWMNREEMMDRFADALTDFM
DSPVREEERINCHHNYTTKEVHYGKKVWITRKGAIRAEAGTSALIPGSMGTASYVVEGLG
YPPALHSAPHGAGRLLSRREAKKRFNAADLDARMSGIVYRPGEEFVDEIPDAYKDIDEVI
AASAQLVKVRHTLHQVLNIKGT
NT seq
1149 nt
NT seq
+upstream
nt +downstream
nt
atggaaatcttcgccaccaagctcgacgacaatgttcttgagcaggcgaaacaactggaa
gctatgcctttcatccatccgcatgtcgccctcatgcccgacgctcactatgggttaggt
tcctctatcggcaccgtgtttggcacgcttcaagcagtcatccccagtgccgtgggagta
gacattgggtgcgggatgatcggtgttcgaactggtttttctgcctcagatctcaaggga
agaaaccttgagaaattaagaagcgccatcgaagccactattccgttatcccccggaaac
tacaactcatggcaactgcgagaaagcgcggaccaccgctgtcgagaactgcatcagtta
gcacttgacaccgaggtggatttgtcccactcccccaagtggcggcagcaactaggtagt
ttgggcggaggaaaccacttcatcgaactctgtcttgatgaaactgagcgagtatggatg
ttcctgcattcaggttctcgtggcgtcggaaataagatagcccgcaagcacatcgctgta
gctcaaaggttatgcgcaaagtggtatatcgatcttcctcatcgagatttggcctacctg
gtagagggcaccgaagaattcgacgcctatctgcgggacctccactgggcgcagactttc
gcgtggatgaaccgggaagaaatgatggaccgctttgccgatgcattaactgacttcatg
gatagcccggtacgtgaagaagagcgcatcaactgccaccacaactacacaacaaaagaa
gtccactatggaaagaaggtgtggataacccggaaaggagccatccgagcagaagctggg
acttcggctcttatcccgggatctatgggaacagcttcctatgttgttgaaggcttagga
tacccgccagctttacattctgcaccgcatggagctggacggctccttagccgcagggaa
gctaagaagcggtttaatgccgcagaccttgatgcgcgaatgagtggtattgtctaccgc
cctggggaggaatttgtagatgaaatccctgatgcctacaaggacattgatgaggttatt
gccgcatcagcacaactagtcaaggtgcggcataccctccaccaggtgctaaatattaag
gggacctag
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