Corynebacterium poyangense: GP475_04720
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Entry
GP475_04720 CDS
T08294
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
cpoy
Corynebacterium poyangense
Pathway
cpoy03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cpoy00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
GP475_04720
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cpoy03019
]
GP475_04720
03009 Ribosome biogenesis [BR:
cpoy03009
]
GP475_04720
Enzymes [BR:
cpoy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
GP475_04720
Messenger RNA biogenesis [BR:
cpoy03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
GP475_04720
Ribosome biogenesis [BR:
cpoy03009
]
Prokaryotic type
rRNA helicases
GP475_04720
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
CMS1
UvrA_inter
DUF5817_CT
AAA_22
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
QNQ90022
UniProt:
A0A7H0SN97
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All DBs
Position
997497..999425
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AA seq
642 aa
AA seq
DB search
MSITDNATGGMDEPDTEFSSDSQDNSQGDAHRQVTGDAKDSGTEFPVTDNPETSELADTP
DTEDGFAGLGLPEDVLTAVRRVGFETPSPIQSETIPLLMRGIDVVGLAQTGTGKTAAFAL
PILARIDKDERSPQALVLAPTRELALQVADSFQSFADHLGRIHVLPIYGGQAYGIQLSGL
RRGAQIIVGTPGRVIDHLEKGSLDISSLKFLVLDEADEMLQMGFQEDVERILADTPEDKQ
VALFSATMPNSIRRISQQYLQDPEEISVRSETRTNTNITQRYLHTAHRNKLDALTRILEV
TEFEAMIVFVRTKFETEELAEKLRARGFNAAAINGDIPQVQRERTVDQLKDGRLDILVAT
DVAARGLDVDRISHVLNYDIPHDTESYVHRIGRTGRAGRSGEAILFVTPRERRMLRSIER
ATNAELVEMDLPTVDEVNATRKAKFADSITESLEDAQLDLFRGLIKHYAEEHDVPLEDVA
AALATQTQAGDEFLMKEPPPEKQRDRGRNRDRGRDFRREGSRDRGERHQNYDLYRLDVGR
CHRVRPGAIVGALANEGGLNSKDFGRITIGAEHSLVELPKKLPKDFFDRLRETRISGQLI
KIERDHGRPPRRNVDRRGGRRDSSRQGQRRGDRGDRRRQWRS
NT seq
1929 nt
NT seq
+upstream
nt +downstream
nt
atgagcataaccgataacgccaccggcggcatggatgagccggatactgaattttcgtcg
gactctcaggacaactcgcagggtgatgcccaccggcaggtcaccggggatgcgaaagat
tctgggaccgaattccccgtaactgataaccctgaaacctctgaattggctgacactccc
gacactgaggatggctttgccggtttaggtttacctgaggatgtgctgactgcggtccgc
cgtgtcggttttgaaacaccctctccgatccaaagcgaaactattccactactgatgcgc
ggaatcgacgtggtgggattagcccaaacaggtactggaaagaccgcggcctttgccctg
cctattttggcgcgtattgataaggatgaacgtagtccccaagccttggttctagctcca
acgcgtgagcttgccctgcaggtggctgactctttccagtcttttgcagatcacttgggt
cggattcatgtgcttccgatttacggaggacaggcctatgggattcaactttctggtctt
cgtcgtggagcacaaattattgttggtacccccggccgcgtcattgatcacttagaaaag
ggatccctggatatttcatccttgaaattcctggtactggatgaagcggatgaaatgttg
caaatggggttccaggaggacgtcgaacggatcctcgctgacaccccagaggacaaacag
gtcgcgttgttctctgccactatgccgaatagtattcgccgaatctcgcagcagtatttg
caggatccggaagagatttcggtgcgttctgaaacccgaaccaacaccaatatcactcag
cggtatctgcatacggcgcatcgcaacaagctagatgctttgactcgtatccttgaggta
actgagtttgaagcgatgattgtctttgttcgcaccaaattcgagactgaagaattagcc
gagaagctgcgcgcacgcggctttaatgcggctgcgattaacggagatattccgcaagtc
cagcgggaacgaacagttgatcagctcaaagatggtcgtctggacattctggtcgctacc
gatgtcgcagcccgaggcttggatgtggaccgaatcagccacgtgttgaactacgacatt
ccacacgacaccgaaagttatgtgcaccgaattgggcgaactgggcgagccgggcgcagc
ggggaagcaatactttttgtgacgccgcgagaacgccgtatgttgcgctctattgagcgt
gccactaatgctgagctggtggagatggatttgccgacggttgacgaggtcaacgctact
cggaaggcgaaattcgctgattccatcacggaatctttagaagatgcgcagttggatctg
tttcgtgggttaattaagcactatgccgaagaacatgatgtccccttggaggatgttgct
gctgctttggcaacccaaactcaggctggagacgagttcttaatgaaagaacctccgccg
gaaaagcagcgtgatcgagggcgtaaccgggatagagggcgagatttccgtcgtgaagga
agtcgtgatcgaggtgagcgccaccaaaactacgatctttatcgtttagatgtggggcga
tgccatcgagtcaggccgggagcaattgtgggggccttggctaatgaaggtgggctcaac
tccaaagacttcggccggatcaccataggcgcagaacacagtctggtggaattgcctaag
aaactcccgaaggatttctttgatcggctccgagaaaccaggatttctgggcagctcatc
aagatcgagcgtgatcatggacgaccccctcgacgcaacgtagatcgtcgaggaggacga
cgagattcttctcgacaaggacaacgtagaggagaccgcggagatcgacgccgtcagtgg
cgcagctag
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