| Entry |
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| Symbol |
rpoC
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| Name |
(GenBank) DNA-directed RNA polymerase subunit beta
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| KO |
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| Organism |
cpp Corynebacterium pseudotuberculosis P54B96
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| Pathway |
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| Brite |
KEGG Orthology (KO) [BR:cpp00001]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
CpP54B96_0326 (rpoC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:cpp03021]
CpP54B96_0326 (rpoC)
03400 DNA repair and recombination proteins [BR:cpp03400]
CpP54B96_0326 (rpoC)
Enzymes [BR:cpp01000]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
CpP54B96_0326 (rpoC)
Transcription machinery [BR:cpp03021]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
CpP54B96_0326 (rpoC)
DNA repair and recombination proteins [BR:cpp03400]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
CpP54B96_0326 (rpoC)
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
342705..346805
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| AA seq |
1366 aa
MAAKAAKQAEFKASSFFETIPWENRGKGSYVIDVNFFDELRIGLATADDIRRWSKGEVKK
PETINYRTLKPEKDGLFCERIFGPTRDWECACGKYKRVRYKGIICERCGVEVTKSKVRRE
RMGHIELAAPVTHIWYFKGVPSRLGYLLDLAPKDLERIIYFAANIITGVDEEARHSDQTT
LEAEMLLEKKDVEADAESEIAERAQKLEEDLAELEAAGAKADARNKVQKAADKEMQHIRE
RAEREIDRLEEIWQTFIKLAPKQMIIDETIYEELVDRYEDYFTGGMGAEAIQTLIRNFDL
DAEAEELREIINNGKGQKKMRALKRLKVVAAFQRSGNDPAGMVLDCIPVIPPELRPMVQL
DGGRFATSDLNDLYRRVINRNNRLKRMIDLGAPEIIVNNEKRMLQESVDALFDNGRRGRP
VTGPGNRPLKSLSDLLKGKQGRFRQNLLGKRVDYSGRSVIIVGPQLKLHECGLPKLMALE
LFKPFVMKRLVENDYAQNIKSAKRMVERQRPEVWDVLEEAISEHPVMLNRAPTLHRLGIQ
AFEPKLVEGKAIQLHPLACEAFNADFDGDQMAVHLPLSAEAQAEARILMLASNNILSPAS
GKPLAMPRLDMVTGLYYLTMDKTEGEIGGQGAYQPATEDGPATGVYSSYAEALMARDRGV
LGLQAKIRVRISHLRPPVEVEAEQFPEGWEQGQTWLADTTLGRIMFNELLPWNYPYLEGV
MVRKGGGSNKILLGDVINDLAATYPMITVAQTMDKMKDAGFYWATRSGVTITMSDVLVLP
NKEEILDRYEAEAAKIERKYWEQGALTERERYDRLVELWKEATDEVGNAVEKLYPDDNPI
PMIVKSGAAGNMRQIWTLAGMKGMVVNSKGDYITRPIKTSFREGLSVLEYFNNSHGSRKG
LADTALRTADSGYLTRRLVDVAQDVIVREDDCGTKQGIRVPVAVEVKDAQGNVTGYTGHS
LIETSVAGRVASVDIKDSEGNVLVPAGENLTDQLIEKLIAAGVAEVKVRSVLTCQTPTGV
CAKCYGKSMATGKLVDIGEAVGIVAAQSIGEPGTQLTMRTFHQGGVGGDITGGLPRVQEL
FEARVPKNRAPIASVAGTVHLEDEGNFYTLTINPDDGSDVVVYEKLSKRQGLATVRVPME
SNPGAMIERTLSEGDHVNVGDRLLRGPADPHDVLEVLGRRGVEQHLVDEVQDVYRAQGVA
IHDKHIEIIIRQMLRRGTVIESGATEFLPGTLVDLSEAKAANAEAIAAGGHPAELRSEIM
GITKASLATESWLSAASFQETTRVLTDAAINKRSDKLIGLKENVIIGKLIPAGTGISRYR
NISVKPTEAARNAAYSIPTYGDSIYGDDSYGEFTGASVPLDEAYDL |
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| NT seq |
4101 nt +upstreamnt +downstreamnt
atggcagctaaagctgctaagcaggcggaatttaaagcatcatcattttttgaaacgatc
ccctgggagaaccgggggaaagggagttacgtgatcgacgtcaacttcttcgacgagctc
cgcatcggcctggctactgccgacgacattcgtcgttggtccaaaggcgaggtcaaaaag
ccggagaccatcaactaccgcaccctgaagccggagaaggacggcctcttctgcgagcga
attttcggcccaacccgcgactgggagtgcgcttgcggtaagtacaagcgtgtccgttac
aagggcatcatctgtgagcgctgtggcgttgaggtgaccaagtccaaggttcgccgtgaa
cgcatgggccacatcgaactggctgcgcccgtcacccacatttggtacttcaagggtgtc
ccgtctcgtctcggttaccttttggacctggctccaaaggatctcgagcgcatcatttac
ttcgcagccaacatcatcactggtgttgacgaggaagctcgccacagcgaccagaccact
cttgaggcagaaatgcttttggagaagaaagacgttgaggctgacgcagagtctgagatc
gcagagcgcgctcagaagctggaagaggaccttgccgagctggaagccgcaggcgctaag
gccgatgcccgcaacaaggtgcaaaaggctgcagataaagagatgcagcacatccgcgag
cgggctgagcgcgagatcgatcgtcttgaggagatctggcagacctttatcaagcttgct
cctaagcagatgatcattgatgagaccatctatgaagagctcgtggatcgttacgaggat
tacttcaccggtggtatgggcgcggaggccatccaaacccttatccgcaactttgacctc
gatgctgaggcagaggaactgcgcgagatcatcaacaatggcaaaggccagaagaagatg
cgtgccctcaagcgactcaaggttgttgctgcattccagcgctcgggcaatgacccagct
ggtatggtgctcgactgcatcccggtgatcccaccggagctgcgtccgatggttcagctc
gatggtggccgttttgctacctccgacctgaacgatctctaccgtcgcgtgattaaccgc
aacaaccgcctcaagcgcatgatcgacctcggtgctcccgagatcatcgtgaacaacgag
aagcgtatgttgcaggagtccgtcgacgcgctctttgataatggtcgccgtggtcgtccg
gtcaccggtcctggcaaccgtccgctgaagtccttgagcgatttgcttaagggcaagcag
ggtcgtttccgtcagaacttgctgggtaagcgtgtcgactactctggtcgttccgttatt
atcgtcggtccacagctgaagctgcatgagtgcggtcttccaaagctcatggctcttgag
ctcttcaagccgtttgttatgaagcgccttgtggaaaacgattacgcgcagaacatcaag
tcggctaagcgcatggttgagcgtcagcgccctgaggtgtgggacgttctagaagaggca
atttctgagcatcctgtgatgcttaaccgtgcacctaccctgcaccgcctaggcatccag
gccttcgagcctaagctcgttgagggtaaagctatccagctgcacccactcgcgtgtgag
gccttcaacgctgacttcgacggtgaccagatggctgtgcacttgccgctatctgctgaa
gcacaggccgaggcgcgcatcctcatgcttgcctccaacaacattctctccccggcatcc
ggtaagccacttgccatgccgcgtctggacatggtgactggtctttattacctcaccatg
gacaagactgagggtgaaattggtggtcagggtgcataccagcctgctactgaggatggt
ccagcaacgggtgtgtactcctcctacgctgaggcacttatggctcgcgaccgtggcgtt
cttggcctgcaggccaagatccgggtacgcattagccatctgcgtccgccggtagaggtt
gaggcagagcagttcccagagggttgggagcagggacaaacctggttggctgataccact
cttggccgcatcatgttcaacgagctcttgccgtggaactacccgtaccttgagggcgtt
atggtccgtaagggtggaggatcgaacaagattctcttgggcgacgtgattaatgatctc
gctgcgacctatccaatgattactgttgctcagacgatggacaagatgaaggacgccggt
ttctactgggcaacccgaagcggcgtgaccatcactatgtctgacgtgctcgttcttcct
aataaggaagaaattcttgaccgctatgaggccgaggctgcaaagatcgagcggaagtac
tgggagcagggtgctctgacagagcgcgagcgctacgaccgtctggtcgagctttggaag
gaggctaccgacgaggtcggtaatgccgtcgagaagctctatccggatgacaacccgatt
cctatgatcgtgaagtccggtgctgccggtaacatgcgtcagatctggacgctggctggc
atgaagggcatggttgtgaactcaaagggtgattacatcacccgaccgattaagacctcc
ttccgtgaaggcctgtcggttcttgagtacttcaacaactctcacggttcgcgtaagggc
ctcgccgataccgctctgcgtaccgccgactcgggttacctcactcgtcgtctggtggac
gttgcgcaggatgttatcgtccgcgaggatgactgcggcaccaagcagggcattcgtgtc
ccagtggccgttgaggttaaggatgctcagggcaacgtcaccggttacaccggacacagc
ctcatcgagacctctgttgctggccgcgtggcttccgttgacatcaaggattccgagggc
aacgttctggtaccagctggtgaaaacctcaccgatcagctcatcgagaagctcatcgcc
gcaggcgttgccgaggtcaaggttcgctccgtgcttacctgccagaccccgaccggtgtg
tgcgctaagtgctatggcaagtccatggctaccggcaagctcgttgatatcggagaggca
gtgggcatcgtcgctgctcagtccattggtgagcccggtacccagctgacaatgcgtacg
ttccaccagggtggcgtcggtggtgacatcaccggtggtcttcctcgtgtccaggagctc
ttcgaggctcgtgttcctaagaatcgcgctccgattgcttctgtggcaggtaccgtacac
cttgaggatgaaggtaacttctacaccctcaccatcaacccagacgatgggtcagatgtt
gtggtctacgagaagctctccaagcgtcagggtcttgctaccgtgcgggttcctatggaa
tccaacccgggcgccatgatcgagcgcaccttgtcagaaggcgaccacgtgaacgtgggc
gaccgtctgctacgcggacctgctgatccgcacgacgtgcttgaggttcttggccgccgt
ggtgttgagcagcacctcgtggacgaggttcaggacgtgtaccgcgcacagggtgtggct
atccacgataagcacatcgagatcatcattcgtcagatgctgcgccgcggcaccgtcatc
gagtccggcgcgacagagttccttccgggtactctcgttgacctttcggaggccaaggcc
gctaacgctgaggctattgctgctggtggacatcccgctgagctccgttcggagatcatg
ggtatcaccaaggcgtcgttggctaccgagtcgtggctgtccgctgcgtccttccaggag
accacacgcgtgcttaccgacgccgccattaacaagcggtccgataagctgatcggcctc
aaggagaacgtgatcatcggtaagctgatcccggcgggtaccggtatttcccgttaccgc
aacatctccgtcaaaccgactgaggcagctcgcaatgcggcttactcaatcccaacgtat
ggagattccatctatggcgatgacagctacggtgaattcaccggcgcttccgtgccactg
gatgaggcctacgatctctaa |
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