Entry |
|
Symbol |
deaD1
|
Name |
(GenBank) DEAD-box helicase
|
KO |
|
Organism |
cpp Corynebacterium pseudotuberculosis P54B96
|
Pathway |
|
Brite |
KEGG Orthology (KO) [BR:cpp00001]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CpP54B96_0822 (deaD1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:cpp03019]
CpP54B96_0822 (deaD1)
03009 Ribosome biogenesis [BR:cpp03009]
CpP54B96_0822 (deaD1)
Enzymes [BR:cpp01000]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
CpP54B96_0822 (deaD1)
Messenger RNA biogenesis [BR:cpp03019]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
CpP54B96_0822 (deaD1)
Ribosome biogenesis [BR:cpp03009]
Prokaryotic type
rRNA helicases
CpP54B96_0822 (deaD1)
|
SSDB |
|
Motif |
|
Other DBs |
|
LinkDB |
|
Position |
859643..861559
|
AA seq |
638 aa
MSITDDATGGANEPDEKILSESQDNSQVDEGSITLDDVIADVDDSRVANTSEDTGSAQEA
DSDSNDGFEALGLPDAILKAVAKVGFETPSPIQAQTIPVLMEGHDVMGLAQTGTGKTAAF
ALPILSRINVKKRHPQALILAPTRELALQVADSFQSFADHLGDIHVLPIYGGQAYGIQLS
GLRRGAQIIVGTPGRVIDHLEKGSLDISNLNYLVLDEADEMLSMGFQEDIERILEDTPAD
KQVALFSATMPNGIRRLSKQYMKDPREIQVKSETRTNTNITQRFLNVAHRNKLDALTRIL
EVTEFEAMIMFVRTKHETEEVAEKLRARGFSAAAINGDIAQAQRERTVDQLKDGRLDILV
ATDVAARGLDVERITHVFNYDIPNDTESYVHRIGRTGRAGRSGEAILFVTPRERRMLRSI
ERATNAELIEMDLPTVDEVNESRKEKFADSITESLEDSQVAIFRNLIKAYAEEHDTPLED
IAAALATQARAGSEFLMKEPPPEKRRDRGDRGSRFERSGDMAVYRLAVGKRQHVRPGAIV
GALANEGGLSNKDFGRITIAVDHTLVELPKGLPQSVFDNLRDTRISGQLINIEKDNGRPG
RRDDYRGDDRRGGYRRDRRDDRRGDRRDRGDRRDRYRG |
NT seq |
1917 nt +upstreamnt +downstreamnt
atgagcattaccgatgacgccaccggcggcgctaacgagccggatgagaagattttgtcg
gaatctcaggacaattcgcaggtagacgaaggcagcatcacacttgatgatgttattgct
gatgtagacgactccagggttgcgaacacttctgaggacaccggctccgcgcaagaagcg
gacagtgacagtaatgatggctttgaggctttgggcctcccagacgcaatccttaaggca
gtcgccaaggttggctttgaaacgccgtctcctattcaggcacagaccatcccagtcctc
atggaggggcatgatgtgatgggtctggctcagaccggtacgggtaagaccgctgcgttt
gccctcccgattctttcccgtatcaatgtgaagaagcgccacccacaggcgctgatcctt
gctcctactcgcgagcttgctcttcaggttgcggactctttccagtcttttgcagaccac
ctcggagacattcatgttctgccgatctatggtgggcaggcatatggtatccaattgtcg
ggtcttcgccgtggcgcgcagatcatcgtgggtaccccaggtcgtgttattgaccacctg
gaaaagggctcactcgatatctctaacctgaactatctcgttcttgacgaggcagatgag
atgctcagcatgggcttccaggaagatatcgagcgtattcttgaggatactcccgcggac
aagcaggttgctttattttctgcgacgatgcccaacggcattcgccgtctgagcaagcag
tacatgaaggatcctcgtgagattcaggtgaaatccgagactcggaccaacaccaatatc
acgcagcggttccttaatgttgctcaccgtaacaagcttgatgccttgactcgaatcctt
gaggtcaccgagtttgaagcgatgattatgttcgtgcgcacaaagcatgaaactgaagag
gtcgcagagaagttgcgtgctcgtggtttttctgccgccgccatcaatggcgatatcgca
caggcacagcgtgagcgcaccgtggaccaactcaaagatggtcgtctagacattcttgtg
gccacagacgtggcagcgcgtggtctggatgtcgagcgcattactcacgtgttcaactac
gacattcctaatgacaccgaatcttatgttcaccgcattggtcgtaccggccgcgctgga
cgtagcggtgaggcaattctttttgttaccccacgtgaacgtcgtatgctgcgctccatt
gagcgtgctaccaatgcagagcttattgaaatggaccttcctacggtcgacgaggttaac
gagtcccgtaaggaaaagtttgcagattccatcacagaatcgctagaagactcccaggtt
gcgattttccggaacttgatcaaggcctacgcagaagagcatgacaccccacttgaggac
attgctgctgccttggctacccaggctcgtgctggtagtgagtttttgatgaaggagcca
ccaccagagaagcgtcgtgatcgtggtgaccgcggttctcgttttgagcgctctggcgat
atggcagtgtatcgccttgccgtgggtaagcgtcagcatgttcgtccgggcgctattgtt
ggcgcactggcaaacgaaggcggattgagcaataaggactttggtcgtatcacaattgct
gtggaccacacgttggtggagcttcctaagggactcccacaatctgtctttgataatcta
cgcgacactcgtatctcgggtcagctgattaacattgagaaggacaatggtcgtccgggg
cgtcgtgatgattaccgcggtgatgaccgtcgtggtggataccgtcgcgatcgtcgtgat
gatcgtcgtggcgaccgccgagaccgcggcgaccgccgtgatcgctatcgtggctag |