Corynebacterium pseudotuberculosis P54B96: CpP54B96_1236
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Entry
CpP54B96_1236 CDS
T01771
Symbol
sigB
Name
(GenBank) RNA polymerase sigma factor sigB
KO
K03087
RNA polymerase nonessential primary-like sigma factor
Organism
cpp
Corynebacterium pseudotuberculosis P54B96
Brite
KEGG Orthology (KO) [BR:
cpp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cpp03021
]
CpP54B96_1236 (sigB)
Transcription machinery [BR:
cpp03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
CpP54B96_1236 (sigB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r3
Sigma70_r4
Sigma70_r1_2
HTH_28
Motif
Other DBs
NCBI-ProteinID:
AFF22372
LinkDB
All DBs
Position
1327502..1328491
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AA seq
329 aa
AA seq
DB search
MTESSSQELAQELIDRGSRRGQTNDNPSADLVRVYLNGIGKTALLSAEDEVELAQTIEVG
LYAAHLLEDSEEPLTRAMKRDLKVLVKDGRKARAHLLEANLRLVVSLAKRYTGRGMPLLD
LIQEGNLGLIRAMEKFDYSKGFKFSTYATWWIRQAITRGMADQSRTIRLPVHLVEQVNKL
SRIKREMYQHLGREATNEELAEESGIDESKIEILLRQSRDPVSLDMPVGADEEAPLGDFI
EDSEATDAESAVVASLRHSDIRSVLDTLERREQDVIRMRYGLDDGVPRTLDQIGRQFGLS
RERVRQIEREVMTKLRDGARADKLRAYAI
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atgacagaatcatccagccaagaactagctcaggagttgattgaccgtggaagtcgccgt
gggcaaaccaatgataatccctctgcagacctcgtccgcgtttatctcaacggaatcggt
aaaaccgctttgctgtccgcagaagatgaagtggagctagcccaaaccattgaggtaggt
ctttatgccgcacatcttctagaggactcagaagaaccactaacgcgcgcaatgaagcgt
gatcttaaagtcttagttaaagacggacgcaaagcccgagctcatcttttagaggcgaat
cttcgccttgtcgtgtctctagctaagcgttatacaggccgtggcatgccgcttcttgat
ctcattcaggaaggcaatcttgggcttatccgagccatggaaaaatttgattattccaag
ggattcaaattttccacctacgcaacctggtggatcagacaggcaatcacgcgaggcatg
gcagatcagtctcggaccatccggcttcctgttcatcttgtagaacaggtaaacaagctt
tcacgaatcaaacgcgaaatgtaccagcatcttggcagagaagctacaaatgaggaactc
gcggaagaatccggaattgacgagtctaagatcgagattcttctacgccaatctcgcgac
ccggttagcttagacatgccagtcggcgccgatgaagaagcccctttgggcgattttatt
gaagactccgaagcaaccgatgccgaatccgcagtcgtcgcttccttgcgacactctgac
atccgttcagtcctggatacacttgagcgacgtgaacaagacgtgatcagaatgcgttat
ggcttagacgatggggtaccccgaactcttgatcaaattggccgacaattcggtttatct
cgcgagcgtgtgcgtcaaatcgagcgtgaagtcatgactaagcttcgcgatggcgcccgc
gcagacaaactccgcgcctacgcgatctaa
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