Corynebacterium pseudotuberculosis P54B96: CpP54B96_1251
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Entry
CpP54B96_1251 CDS
T01771
Symbol
gatR
Name
(GenBank) Galactitol utilization operon repressor
KO
K03436
DeoR family transcriptional regulator, fructose operon transcriptional repressor
Organism
cpp
Corynebacterium pseudotuberculosis P54B96
Brite
KEGG Orthology (KO) [BR:
cpp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cpp03000
]
CpP54B96_1251 (gatR)
Transcription factors [BR:
cpp03000
]
Prokaryotic type
Helix-turn-helix
DeoR family
CpP54B96_1251 (gatR)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DeoRC
HTH_DeoR
GntR
HTH_11
HVO_A0261_N
HTH_PafC
HTH_20
Put_DNA-bind_N
HTH_Crp_2
HTH_28
HTH_23
Rrf2
DUF8612
HVO_A0114
FeoC
MarR_2
DUF4423
HTH_5
PqqD
Motif
Other DBs
NCBI-ProteinID:
AFF22387
LinkDB
All DBs
Position
1345820..1346596
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AA seq
258 aa
AA seq
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MYSEERRRQIASLTAVEGRVNVTELAARFDVTAETIRRDLAVLDREGVVHRVHGGAVANQ
TFQTTEFSLDTRARSASGAKNSIAHAALSYLPESHGGMFLDAGTTTAALAELLSVQPAAK
HWSIVTNSLSIALTLANSGLDEIQLLGGSVRAITQAVVGDTALRTLALMRADVAFIGTNA
LTIDHGLSTADSQEAAIKSAMITNAHKVVVLCDSTKMGTDYLVSFGSVKDIDVVITDSNA
PESFIKALREHDVEVITA
NT seq
777 nt
NT seq
+upstream
nt +downstream
nt
atgtactcagaagaacgacggcgccaaatagcctctctcacggcggtagaaggacgcgtc
aatgtcactgagcttgccgcccggtttgatgttactgctgagactattcgtcgagacttg
gcggtgctcgaccgtgaaggggttgttcatcgcgttcacggcggcgcggtagcaaaccaa
acttttcaaaccaccgaatttagtttagatacccgtgcgcgttccgcatccggagctaaa
aattccattgcgcatgctgctctatcctacctccctgaatctcatggtggaatgttcctc
gacgcaggaacaactacggccgcgctagcggaactcttatcagtccaacctgccgcaaag
cactggtcgatcgttaccaacagcctttctattgcgttgacgcttgcaaactcaggcctc
gatgagattcagctccttggcggaagcgtccgcgcaattactcaagcagttgtgggtgac
actgcactgcgaaccttggccctcatgagagcagacgtcgcgtttatcggaacaaatgcg
ctaacaatcgatcacggtctttccactgccgattctcaggaggcagccatcaaatctgcc
atgatcactaatgcccataaagtggtcgttttgtgcgactcaacaaaaatgggaaccgat
tatctagtcagctttggttcagttaaagacatagacgtagtgattacagattcaaatgct
cctgaatcctttatcaaagccctccgtgagcatgacgttgaagttataactgcataa
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