Corynebacterium pseudotuberculosis C231: CPC231_01160
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Entry
CPC231_01160 CDS
T01877
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
cpq
Corynebacterium pseudotuberculosis C231
Brite
KEGG Orthology (KO) [BR:
cpq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cpq03032
]
CPC231_01160 (topA)
03400 DNA repair and recombination proteins [BR:
cpq03400
]
CPC231_01160 (topA)
Enzymes [BR:
cpq01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
CPC231_01160 (topA)
DNA replication proteins [BR:
cpq03032
]
Prokaryotic type
DNA Topoisomerases
CPC231_01160 (topA)
DNA repair and recombination proteins [BR:
cpq03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
CPC231_01160 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
ADL09722
UniProt:
D9QDZ9
LinkDB
All DBs
Position
232971..235907
Genome browser
AA seq
978 aa
AA seq
DB search
MAEKSGPKRLVIVESATKAKKIAPYLGDDYIVEASVGHIRDLPRGAADVPTKYKKEPWAR
LGVNTENGFAPLYVVSPDKKKKVADLKQKLKLVDELLLATDPDREGEAIAWHLLEVLKPK
VPVKRMVFNEITKPAILAAAENTRELDANLVDAQETRRILDRLYGYEVSPVLWKKVMPRL
SAGRVQSVATRVIVERERERMAFVSAEYWDIEAEFDTGKPDTDGNPHQFTGRLTSVDGKR
VATGRDFNDRGELKGDAVVVNKQRAEALVAELTGAPMNVAKVEEKPYTRRPYAPFMTSTL
QQEAGRKLHFTSERTMRIAQRLYENGHITYMRTDSTTLSEQGLKAAREQAISLYGNDYVA
EGPRRYDRKVKNSQEAHEAIRPAGEHFATPGELHAQLDAEEFKLYELIWQRTVASQMADA
KGTSMKVTIAGKNAEFSATGRTITFPGFLRAYVEITKLSDGRDLADNAERHLPRLAEGDA
LDVNKLEVDEHSTNPPARYTEASLVKKMEELGIGRPSTYASIIKTIQDRGYVYSRGNALV
PSWVAFAVVGLLEKSFSALVDYDFTSSMEDELDDIAAGREDGTEWLTGFYFGDAAASDAT
AESIARHGGLKALVGDNLEHIDARLVNSLELFQDSEGRAVNVRVGRYGPYIERQIGVSAD
GEAEYQRANLSDTTTPDELTLDVAEKLFATPQSGRELGRNPKNDRMIVAKEGRFGPYVTE
LVNDDERAQVEAKAEEIVASERKAEDEQRAAEGKRAKNWETKTAVKQKEKRIAEIVDETL
KPGTASLFKDMEPATVTLEQALQLLSLPREVGVDPSDNAPITAQNGRYGPYLKKGNDSRS
LASEEQIFTITLDEARRIYAEPKRRGRGATSQSVIKELGDNDVSGKPMSVRDGRFGPYVT
DGTTNASLRRGDDPTELTDARANELLSERRAKEAADGGAEKKATKKAAKKSTKKTTAKKA
VKKPAKTTKRVVKAGRKK
NT seq
2937 nt
NT seq
+upstream
nt +downstream
nt
atggctgaaaagagcggacctaagcgccttgtgatcgtcgagtctgcgacgaaggctaag
aaaattgccccttacttaggcgacgactacatagtcgaggcctccgtggggcacattcgc
gatctcccgcgaggcgctgcagatgttcccactaagtacaaaaaggagccgtgggcccgg
cttggtgtgaacacagagaacggctttgcgcctttgtatgtggttagcccggacaagaag
aagaaagtcgccgatctcaagcaaaagcttaagcttgtcgacgaactcctactggccaca
gaccccgaccgcgagggggaagccatcgcgtggcacttgcttgaggttctcaagcctaaa
gtgcccgtgaagcgcatggtgttcaatgagatcactaaaccggcgattctggctgctgcg
gagaacactcgtgagttggacgcgaacctggtcgacgcgcaggagactcgtcgtatcctc
gatcgtctctatggctatgaggtctcccctgtgctgtggaagaaagtcatgccgcggctt
tctgctggccgcgttcagtcggtggctacccgcgtgatcgttgagcgggagcgtgagcgt
atggcttttgtatccgccgaatactgggacattgaggcggaatttgatacgggtaagcct
gatacggatggcaatccacatcaattcactggccgtcttacctctgtcgacggcaaacgc
gtggctacgggccgcgattttaacgaccgtggcgagcttaaaggcgacgcggtggtcgtg
aataagcaacgcgctgaggcattggttgcggagctgacaggcgctccaatgaacgtggcc
aaggtagaagaaaagccttacactcgtcgcccttatgcgccgtttatgacttcaactttg
cagcaagaagctggacgcaagctgcactttacctctgagcgcacgatgcgtatcgcgcaa
cgtctgtatgaaaacggccatatcacttatatgcgtacggattccacgacgctgtcggag
caaggcttaaaagcggctcgggaacaagctatttcgctttacgggaatgattatgtggca
gaagggccgcgtcgttatgaccgaaaagtaaagaactcacaggaggctcacgaggctatc
cgtccggcaggagagcattttgctacccctggagagctgcacgcccagctcgatgccgag
gaatttaaactctacgagctcatctggcagcgcaccgtagcttcccaaatggcagacgcc
aagggcacatccatgaaggtgaccattgcgggaaagaacgctgagttctccgctactgga
cgaacaatcacgttccccggcttcctgcgcgcatacgtggaaatcaccaagctttccgac
ggccgcgaccttgccgataacgccgagcgtcacctgcctcgtctcgctgagggcgatgcc
ttagacgtgaacaagctggaagtcgacgagcactccaccaatccgcctgcgcgctataca
gaggcgtcgttggtgaaaaaaatggaggagctgggcatcggacgcccatcgacgtatgcc
tcgatcatcaagaccattcaagatcgcggatacgtttactcccgcggtaatgctctggtc
ccaagctgggtagcttttgcggttgtcggtcttttagagaagagcttctctgctcttgtc
gactacgatttcacctcgtcgatggaagatgagctggatgatatcgccgcaggacgagaa
gacggtactgagtggctcactggcttctattttggagatgccgcagcctccgatgccacc
gcagaatctattgcacgtcacggcgggcttaaagcacttgtcggcgacaacctcgagcat
attgacgcgcgtttggttaactccttagaactcttccaagactcagaaggccgtgccgtt
aatgtccgcgttggtcggtacggcccctatatcgaacggcagatcggcgtcagtgctgat
ggcgaggccgagtatcagcgcgccaatctctcagacaccaccaccccagacgagctgacc
ctcgatgtggcggagaaactgtttgcgactccgcaatctggccgtgagctgggcagaaac
cccaagaacgatcgcatgattgtggccaaggaagggcgttttgggccttacgtcaccgag
ttggttaacgatgatgagcgtgctcaggtggaagccaaagcagaggagatcgtcgcctct
gagcgcaaagctgaggatgagcagcgtgctgccgaaggcaaacgcgccaagaactgggag
actaaaactgcagttaagcagaaagaaaagcggatcgctgagatcgtcgatgagactctg
aagccaggcaccgcctcactgttcaaggatatggagccagccacagttacgcttgagcaa
gccctccagcttttgtccttgccacgcgaggtgggagttgatcctagcgataatgcaccc
attaccgcgcagaacggtcgctatggcccctacctgaaaaagggtaatgactcgcgctcg
ctggccagcgaagagcaaatctttactatcactctggatgaggcccgccgaatttacgct
gagcctaaacgacgcggccgaggcgctacctcccagtctgtgattaaagaactaggcgat
aatgacgtctccggcaagccaatgtccgtgcgtgatggacgttttgggccttatgtaacc
gatggcactaccaatgcttctttgcgacgaggcgacgaccccacggagcttacagacgct
cgtgctaacgagctactttcggaacgccgtgccaaggaggctgcggacggtggcgcagaa
aagaaagctacgaaaaaagctgcgaagaagtccaccaagaaaaccacggcgaaaaaagcc
gtgaaaaaacctgcaaagactacaaaacgagtggtcaaagctggacgtaagaaatag
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