Corynebacterium pseudotuberculosis C231: CPC231_04075
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Entry
CPC231_04075 CDS
T01877
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
cpq
Corynebacterium pseudotuberculosis C231
Pathway
cpq03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cpq00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CPC231_04075
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cpq03019
]
CPC231_04075
03009 Ribosome biogenesis [BR:
cpq03009
]
CPC231_04075
Enzymes [BR:
cpq01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
CPC231_04075
Messenger RNA biogenesis [BR:
cpq03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
CPC231_04075
Ribosome biogenesis [BR:
cpq03009
]
Prokaryotic type
rRNA helicases
CPC231_04075
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DeaD_dimer
DbpA
ResIII
CMS1
UvrA_inter
adh_short
Surface-like_ins_dom
Cj1289-like_C
Motif
Other DBs
NCBI-ProteinID:
ADL10293
UniProt:
D9Q9R7
LinkDB
All DBs
Position
859615..861567
Genome browser
AA seq
650 aa
AA seq
DB search
MSITDDATGGANEPDEKILSESQDNSQVDEGSITLDDVIADVDDSRVANTSEDTGSAQEA
DSDSNDGFEALGLPDAILKAVAKVGFETPSPIQAQTIPVLMEGHDVMGLAQTGTGKTAAF
ALPILSRINVKKRHPQALILAPTRELALQVADSFQSFADHLGDIHVLPIYGGQAYGIQLS
GLRRGAQIIVGTPGRVIDHLEKGSLDISNLNYLVLDEADEMLSMGFQEDIERILEDTPAD
KQVALFSATMPNGIRRLSKQYMKDPREIQVKSETRTNTNITQRFLNVAHRNKLDALTRIL
EVTEFEAMIMFVRTKHETEEVAEKLRARGFSAAAINGDIAQAQRERTVDQLKDGRLDILV
ATDVAARGLDVERITHVFNYDIPNDTESYVHRIGRTGRAGRSGEAILFVTPRERRMLRSI
ERATNAELIEMDLPTVDEVNESRKEKFADSITESLEDSQVAIFRNLIKAYAEEHDTPLED
IAAALATQARAGSEFLMKEPPPEKRRERRDRFDRDDRRDRGDRGSRFERSGDMAVYRLAV
GKRQHVRPGAIVGALANEGGLSNKDFGRITIAVDHTLVELPKGLPQSVFDNLRDTRISGQ
LINIEKDNGRPGRRDDYRGDDRRGGYRRDRRDDRRGDRRDRGDRRDRYRG
NT seq
1953 nt
NT seq
+upstream
nt +downstream
nt
atgagcattaccgatgacgccaccggcggcgctaacgagccggatgagaagattttgtcg
gaatctcaggacaattcgcaggtagacgaaggcagcatcacacttgatgatgttattgct
gatgtagacgactccagggttgcgaacacttctgaggacaccggctccgcgcaagaagcg
gacagtgacagtaatgatggctttgaggctttgggcctcccagacgcaatccttaaggca
gtcgccaaggttggctttgaaacgccgtctcctattcaggcacagaccatcccagtcctc
atggaggggcatgatgtgatgggtctggctcagaccggtacgggtaagaccgctgcgttt
gccctcccgattctttcccgtatcaatgtgaagaagcgccacccacaggcgctgatcctt
gctcctactcgcgagcttgctcttcaggttgcggactctttccagtcttttgcagaccac
ctcggagacattcatgttctgccgatctatggtgggcaggcatatggtatccaattgtcg
ggtcttcgccgtggcgcgcagatcatcgtgggtaccccaggtcgtgttattgaccacctg
gaaaagggctcactcgatatctctaacctgaactatctcgttcttgacgaggcagatgag
atgctcagcatgggcttccaggaagatatcgagcgtattcttgaggatactcccgcggac
aagcaggttgctttattttctgcgacgatgcccaacggcattcgccgtctgagcaagcag
tacatgaaggatcctcgtgagattcaggtgaaatccgagactcggaccaacaccaatatc
acgcagcggttccttaatgttgctcaccgtaacaagcttgatgccttgactcgaatcctt
gaggtcaccgagtttgaagcgatgattatgttcgtgcgcacaaagcatgaaactgaagag
gtcgcagagaagttgcgtgctcgtggtttttctgccgccgccatcaatggcgatatcgca
caggcacagcgtgagcgcaccgtggaccaactcaaagatggtcgtctagacattcttgtg
gccacagacgtggcagcgcgtggtctggatgtcgagcgcattactcacgtgttcaactac
gacattcctaatgacaccgaatcttatgttcaccgcattggtcgtaccggccgcgctgga
cgtagcggtgaggcaattctttttgttaccccacgtgaacgtcgtatgctgcgctccatt
gagcgtgctaccaatgcagagcttattgaaatggaccttcctacggtcgacgaggttaac
gagtcccgtaaggaaaagtttgcagattccatcacagaatcgctagaagactcccaggtt
gcgattttccggaacttgatcaaggcctacgcagaagagcatgacaccccacttgaggac
attgctgctgccttggctacccaggctcgtgctggtagtgagtttttgatgaaggagcca
ccaccagagaagcgtcgtgagcgtcgcgatcgctttgaccgggacgatcgtcgtgatcgt
ggtgaccgcggttctcgttttgagcgctctggcgatatggcagtgtatcgccttgccgtg
ggtaagcgtcagcatgttcgtccgggcgctattgttggcgcactggcaaacgaaggcgga
ttgagcaataaggactttggtcgtatcacaattgctgtggaccacacgttggtggagctt
cctaagggactcccacaatctgtctttgataatctacgcgacactcgtatctcgggtcag
ctgattaacattgagaaggacaatggtcgtccggggcgtcgtgatgattaccgcggtgat
gaccgtcgtggtggataccgtcgcgatcgtcgtgatgatcgtcgtggcgaccgccgagac
cgcggcgaccgccgtgatcgctatcgtggctag
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