Corynebacterium pseudotuberculosis C231: CPC231_10325
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Entry
CPC231_10325 CDS
T01877
Name
(GenBank) Fpg/Nei family DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
cpq
Corynebacterium pseudotuberculosis C231
Pathway
cpq03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
cpq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
CPC231_10325
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cpq03400
]
CPC231_10325
Enzymes [BR:
cpq01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
CPC231_10325
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
CPC231_10325
DNA repair and recombination proteins [BR:
cpq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
CPC231_10325
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
H2TH
Fapy_DNA_glyco
zf-FPG_IleRS
Motif
Other DBs
NCBI-ProteinID:
ADL11487
UniProt:
D9QDA2
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All DBs
Position
2260361..2261182
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AA seq
273 aa
AA seq
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MMDSMPEGHVIHRLARELNKHFQGKAPRVTSPQGRFAAEAALIHAAPFYQAHAWGKHLFI
EFDAPTPERIVHIHLGLIGSLHFDPIEEAKGQIRLRIEGDKVAANLRGPQWCRLITTEEM
EVAVGKLGADPLRPDSDLSLVCQRVARSQRSIGSLLMDQRLFAGVGNIYRAESLFRLGIS
PFTPGREVENLGQIWEDLVYLMQEGVRVGRIDTVRPEHTPQAMGRAPRKDDHGGEVYVYR
RLGQPCYVCGTPISGQVMEGRNLFWCPTCQPRP
NT seq
822 nt
NT seq
+upstream
nt +downstream
nt
atgatggacagcatgccagaaggccatgtcatccaccggctcgcccgcgagctcaacaag
cattttcaaggaaaagcgccacgcgtcacatcccctcagggaagattcgccgcagaagca
gcacttatccacgccgctccgttttatcaggcccacgcatggggcaagcatcttttcatt
gaattcgatgcccccacgccagaacgcattgtgcatatccacttaggcctgatcggaagc
ctgcattttgacccgattgaagaggccaaggggcagatccgactacggatagagggtgac
aaagtagcagcaaatctacgaggaccacagtggtgtcgccttattacgacggaagagatg
gaggtagccgtcggcaagcttggtgcagacccgctgcgcccagactcagacctaagcctc
gtttgccagcgtgtcgcgcgttcacagagatcgatcggatcgttactcatggaccagcgg
ctttttgccggcgtggggaatatctaccgtgcggaatcgctctttcgcctggggataagc
ccctttacgcccggccgcgaagtggaaaatcttggccaaatatgggaagacttggtttat
ctcatgcaggagggggtgcgggtaggacgcatcgataccgtccgtcctgaacacactcct
caagccatgggccgagcaccccgtaaagacgaccatggcggagaggtctatgtgtatcgt
cgattgggccagccctgttatgtgtgcggcacacctatcagcgggcaagtaatggagggt
cgaaacctcttctggtgtcccacctgccagcctcgaccatag
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