Clostridium perfringens SM101: CPR_0007
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Entry
CPR_0007 CDS
T00379
Symbol
gyrA
Name
(GenBank) DNA gyrase, A subunit
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
cpr
Clostridium perfringens SM101
Brite
KEGG Orthology (KO) [BR:
cpr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cpr03032
]
CPR_0007 (gyrA)
03400 DNA repair and recombination proteins [BR:
cpr03400
]
CPR_0007 (gyrA)
Enzymes [BR:
cpr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
CPR_0007 (gyrA)
DNA replication proteins [BR:
cpr03032
]
Prokaryotic type
DNA Topoisomerases
CPR_0007 (gyrA)
DNA repair and recombination proteins [BR:
cpr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
CPR_0007 (gyrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
MRP-S35
HTH_37
zf-C2H2_aberr
Motif
Other DBs
NCBI-ProteinID:
ABG85405
UniProt:
Q0SWX8
LinkDB
All DBs
Position
6925..9444
Genome browser
AA seq
839 aa
AA seq
DB search
MSLNEGKVIPIDINKEMKKCYIDYAMSVIVGRALPDVRDGLKPVHRRILYSMQELGLYPE
RGYRKCARIVGEVLGKYHPHGDSSVYDALVRMAQDFSLRYMLVDGHGNFGSVDGDSAAAM
RYTEAKMNKIASEMLRDINKNTVDFTPNFDGEEKEPVVLPSRYPNLLVNGSSGIAVGMAT
NIPPHNLGEVIDGTIALIDNPELTSLELMTYIKGPDFPTAGIIMGKSGIRAAYETGKGRI
VVRAKAEIEEENGRHKIIVTELPYQVNKAKLIEYIADLVKDKKITGISDLRDESDREGMR
MVIELKRDANPNVTLNLLYKHTKMQDTFGVIMLALVDNQPQILNLKQVLVHYINFQKDVI
TRRTQFELNKAKERAHILEGLIIALDNIDEVINIIRSSKTSEIAKNTLIERFSLSEKQAA
AILEMRLRRLTGLERDKIENEYNELMKLIDYLNAILASEERLLEVIKEELLEIKSKYSDE
RRTQIEKQENEIDIEDLIQEEDVVITLTHTGYIKRISSDVYSAQKRGGKGIQAMTTKEDD
FVENVLVTSTHSNLLFFTTKGKVYKIKAYEVPDAGRTAKGTNLVNILPLEADEKIQTVLS
FKDVQEDGYLFMGTKLGIVKKTPLKDFKNIRKNGLIALNLREGDELLRAKITYGDADIIF
VTQDGNAIRFNETDVRPMGRTASGVKAISLREGDVAVCMDIAVEDEKLLVVSENGYGKRT
NLDEYKVQNRGGIGLITYKVSDKTGKVVGATVCKEDDELMLINNQGVAIRINVSDISVTS
RSAMGVKLMRTLEDEAVVTIAKISGDTNEEEEEMTLLDEPEDTNIIVEEVATEVKDEEN
NT seq
2520 nt
NT seq
+upstream
nt +downstream
nt
atgagcttaaatgagggaaaagtaatacccatagatataaataaagaaatgaaaaagtgc
tacatagattatgctatgagcgttattgttggtagagcattaccagatgttagagatggt
ttaaaaccagttcacagaagaattttatattcaatgcaagaattaggactatatcctgaa
agaggatatagaaaatgtgccagaatagttggggaagttttaggtaaataccacccacat
ggtgattcatcagtttatgatgcattagttagaatggcacaggatttctctttaagatat
atgcttgttgacggacatggtaactttgggtctgttgatggagactcagcagcggcaatg
agatatacagaagctaaaatgaataaaatagcttctgaaatgcttagagatattaataaa
aatacagttgattttactccaaactttgatggtgaggaaaaagaaccagttgtattacct
tcaagatatcctaaccttttagttaatggttcatcaggtatagctgttggtatggctact
aatataccaccacataacttaggtgaggtaattgatggaactatagctcttatagacaat
ccagaattaacaagcttagaattaatgacatacattaaaggaccagatttccctacagca
ggaataataatgggtaaatcaggaataagagctgcttatgaaactggaaaaggtagaata
gtagtaagagctaaagctgaaattgaagaggaaaatggaagacataaaataatagtaact
gaacttccatatcaagttaataaggctaagcttatagaatatattgcagatcttgttaaa
gacaaaaagattactggaatatcagatttaagagatgaatctgatagagaaggtatgaga
atggttatagaacttaagagagatgcaaatccaaatgttacattaaatcttttatataaa
catacaaaaatgcaagacacatttggagttataatgcttgctttagttgataatcaacca
caaatattaaacttaaaacaagttttagttcactatataaacttccaaaaggatgttata
actagaagaactcaatttgagcttaataaagctaaagagagagctcacatattagaagga
ttaataatagcccttgataatattgatgaggttataaatatcataagaagttctaagact
tcagaaatagctaaaaacacacttattgaaagatttagtttaagtgaaaagcaagctgct
gcaatcttagaaatgagacttagaagacttactggtcttgaaagagataagattgaaaat
gagtataatgagcttatgaagttaatagattacttaaatgcaatcttagctagtgaggaa
agattattagaggttataaaagaagagcttctagaaataaaatctaagtactcagatgaa
agaagaacacaaatagaaaagcaagaaaatgaaatagatatagaagacttaatacaagaa
gaggatgttgtaataactcttactcatactggatatattaagagaatatcttcagatgtt
tactcagctcaaaagagaggtggtaagggaatacaagcaatgacaacaaaagaagatgac
tttgttgaaaatgtacttgtaacatcaacacactcaaacttattattctttacaactaag
ggtaaggtttataagataaaagcttatgaagtaccagacgcaggaagaactgctaaggga
acaaatcttgtaaatatattaccactagaagcagatgaaaaaatacaaactgttctttca
tttaaggatgttcaagaagatggatacttatttatgggaactaaactaggaatagttaag
aaaacaccattaaaagacttcaagaacataagaaagaatggattaatagcattaaacctt
agagaaggtgacgagcttctaagagctaaaataacatatggagacgcagatattatattt
gtaactcaagatggtaatgctataagatttaatgaaacagatgttagacctatgggtaga
actgcatctggagttaaagctataagcttaagagaaggcgacgttgctgtttgtatggat
atagctgtagaagacgaaaaattactagttgtcagtgaaaatggttatggtaagagaact
aacctagatgaatataaagttcaaaatagaggtggaataggtcttataacatataaagta
tctgataagactggtaaagtagttggtgctactgtatgtaaagaagatgatgagcttatg
cttataaataaccaaggggtagctataagaataaatgtaagtgatatttcagttacaagt
agatctgcaatgggagttaaacttatgaggactctagaagatgaagctgttgtaactatt
gctaaaatctctggagatactaatgaagaggaagaagaaatgactttattagatgaacca
gaagatacaaatataattgtagaagaagtagctactgaagttaaggatgaagaaaactaa
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