Clostridium perfringens SM101: CPR_0025
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Entry
CPR_0025 CDS
T00379
Symbol
addA
Name
(GenBank) recombination helicase AddA
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
cpr
Clostridium perfringens SM101
Brite
KEGG Orthology (KO) [BR:
cpr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cpr03400
]
CPR_0025 (addA)
Enzymes [BR:
cpr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CPR_0025 (addA)
DNA repair and recombination proteins [BR:
cpr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
CPR_0025 (addA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
ResIII
DEAD
AAA_30
AAA_12
AAA_11
Catalase-rel
Motif
Other DBs
NCBI-ProteinID:
ABG86634
UniProt:
Q0SWW4
LinkDB
All DBs
Position
29654..33466
Genome browser
AA seq
1270 aa
AA seq
DB search
MGTKWTEEQELAINTRKCNLLVAAAAGSGKTAVLVERIIKMITEGENPVDIDKLLVVTFT
NAAASEMRERIGDAISKALEKDPSSEVLQRQLALLNRASITTMHSFCLEVIKNNFHLIDL
DPGFRIGDQTECELIKQDILADLFEDMYAKDDECFKDLVEAYGGSKSDDNLNSIILKFYN
FIMSGPWPESWLKDKVEEFNINSIEELEGKKWIEVLKESIILDLNNAYSMLTQARDIAEM
GGGLEPYLVNIYPEIIQVEELRIALSEGIVKFYNKLMGASFGRLKSVRKASVDDEKALEK
TKSLRDESKKIIENLRDNVFETSLEEAVLGMKKMYPLMKCLSGLIIEFSNRYRDKKREKD
ILDFNDLEHLCLEILIDKDEEGNIKPSQVALEFKDKFEEVLVDEYQDSNTIQETIVGMVS
RRDVENPNVFMVGDVKQSIYKFRQANPELFLEKYINYREFEDSNRKIMLYKNFRSREEII
NGVNYIFKTLMSNTVGELEYDEKEALNLGASYGELNEENVEKEYIDEIENLKVAGDIELN
ILNKAGNKDYSDDELGEEEEDLDSIQLEARIIGKKINELMNPEDGSHYMVFDKDLGKYRK
IKYKDIVILLRATKNWADTFVDELGTYGIPVYADTGTGYFQTIEIRTILALLHIIDNPMQ
DIYILSSLRSPIFSFTSEEFADLRLLNKDKYFFEIIKEVVDGIYDESISKDLKGKCKYFL
DYLNKWREKAAYMPIDEFIWFLYSDTSYYGYVGTMPNGVQRQANLRILFQRAKQYESTSF
KGLFNFINFINKLKKSSGDMGSAKILGENENVVRIMSIHKSKGLEFPVVILGGTGKQFNK
MDLREDILLHETLGIGTNCIDVKKRIKYDTLQKHAIKKKCELEVLSEEMRILYVAFTRAK
EKLIITGAVSDLEKSCENWCKASASSEDNRINPGNVLKGKSYLDWIGMALTKHKDGDAIR
NVGNGDITLNLDDKSNWSFKSFDRSELLETNNNKKEKNNIDIFESNNWIESKKDIKEVIE
IRNRLGFKYKYIESCNTPSNISVTELKRAHQEEEFMQESYNIIDNESSEENKKEKIKRKP
RFMEERQEEFSAAKKGTITHFVMQHIDLDKVTYIDEIREEVLKMVKKELLTEEEGKVVNV
FKIQKFFKSELGQRMLSSYKSGKKVYRELPFITEIPSSIIEKNLDPKIYGEEKVRLQGII
DAFFEEEDGYVLLDYKTDYVKEGEEEAFINKYKIQINLYKDTLNKILGEEVKEAYLYSFY
LEKELKISKE
NT seq
3813 nt
NT seq
+upstream
nt +downstream
nt
atggggactaaatggactgaagaacaagaattagctataaatactagaaaatgcaacctt
ttagtagcggctgcggctggctcaggaaaaactgctgtattagttgaaagaattataaaa
atgataacagagggtgaaaatcctgttgatatagataagttactagttgttacatttact
aatgctgctgcctctgaaatgagagagagaataggtgatgcgatatctaaagctttggag
aaggatcctagttctgaagtgcttcaaagacaattagctcttttaaatagagctagtata
acaactatgcattctttttgtttagaagttataaaaaataatttccacttaatagactta
gacccagggtttagaataggagatcaaacagaatgtgaacttataaagcaagatatttta
gctgacctttttgaggatatgtatgctaaggatgatgagtgctttaaagatttagttgag
gcttatggtggaagcaaaagtgatgataatttaaatagcataatattaaaattctataat
tttataatgagtggtccttggccagaatcttggttaaaggataaggtagaagaatttaat
ataaattctatagaggaacttgaaggcaagaagtggatagaagtcttaaaggaaagtata
attttagacttaaataatgcatattcaatgcttactcaagctagggatatagctgaaatg
ggtggaggacttgagccttatttagttaatatatatcctgaaataattcaagttgaagag
cttagaattgctttaagtgaaggaatagtaaagttttataataagcttatgggagcaagc
tttggaagactaaaatcagttagaaaagctagtgttgatgatgaaaaagccttagaaaaa
actaaaagtcttagagatgaaagtaaaaaaataatagaaaatttaagggataatgttttt
gaaacttccttagaagaagctgttttaggaatgaaaaagatgtatccattaatgaaatgt
ttaagtggtttaataattgaattttctaataggtatagagataaaaaaagagaaaaggat
attttagattttaatgacttagagcatctttgcttagaaatattaatagataaagatgaa
gaggggaatataaaaccttcacaggttgccttagaatttaaggataaatttgaagaagtt
ttagttgatgaatatcaagatagtaataccattcaagaaactattgtaggaatggtatca
agaagagatgtagaaaatcctaatgtattcatggttggagatgttaaacaaagtatatat
aagtttagacaggcaaatccagaacttttcttagagaaatatattaattatagagagttt
gaagattctaatagaaaaataatgctttataaaaactttagaagtagagaagaaattata
aatggagtaaactatatctttaaaaccttaatgagcaatactgtaggagagcttgaatat
gatgaaaaagaggctttaaacctaggggcttcctatggggagttaaatgaggaaaatgta
gagaaagaatatatagatgaaatagaaaatctaaaggtcgctggtgatatagagctaaac
atattaaataaagcaggtaacaaggattatagtgatgatgaactaggagaagaggaagaa
gatttagatagcatacagttagaagctagaataattggcaaaaagattaatgagctaatg
aatcctgaagatggaagtcactatatggtttttgataaggatttaggaaaatatagaaag
attaaatacaaggatattgttatcctgcttagagcaactaaaaattgggcagataccttt
gttgatgagttagggacttatggaatacctgtttatgctgacacaggaacaggatatttt
caaactattgaaattagaactatattagccttattacacataatagataatccaatgcag
gatatttatatattatcttccttacgttcaccaatattttcatttacatctgaagaattt
gcagatttaagattattaaataaagataaatacttctttgaaataataaaggaagttgta
gatggaatttatgatgaaagtatatctaaagatttaaaaggaaagtgtaagtacttccta
gactatttaaataaatggagagaaaaggcagcatatatgccaatagatgaatttatttgg
ttcttatattctgatacatcatactatgggtatgttggaacaatgccaaatggagttcaa
cgtcaagcaaatttaagaatactattccaaagagcaaagcaatatgaatcaactagtttt
aagggattatttaattttataaacttcataaataagcttaaaaagtcttctggagatatg
ggaagtgcaaagattcttggagaaaatgagaatgttgtaaggataatgagtattcacaag
agtaaagggctagagttcccagttgttatattaggtggaacaggaaagcaatttaacaag
atggacttaagagaagatatactacttcatgaaaccttaggtataggaacaaattgtata
gatgttaagaagagaataaagtatgatactcttcaaaagcatgctataaagaaaaaatgt
gaattagaagttttatcagaagaaatgaggatactttatgttgcctttacaagagctaag
gaaaaattaattataactggtgctgtatcagatttagaaaagtcttgtgaaaactggtgc
aaagcttcagcttcttcagaggataatagaataaaccctggaaatgttttaaagggaaag
agttatttagattggattggcatggctttaacaaagcacaaggatggagatgctataaga
aatgttggtaatggagatataactttaaatttagatgataaatctaattggagttttaaa
agctttgatagaagtgagcttttagaaacaaacaataataaaaaagaaaaaaataatatt
gatatttttgaaagtaataattggattgaatctaaaaaagatataaaagaagttatagaa
ataagaaatagactaggctttaaatataaatatatagagtcttgtaatactccttcaaat
atttctgtaaccgaattaaagagagctcatcaagaagaagagtttatgcaagaaagttat
aatattattgataatgaaagtagtgaagaaaataaaaaagaaaaaataaaaagaaaacca
agatttatggaggaaagacaggaagaattctcagcagctaagaaggggactataactcac
tttgtaatgcaacatattgatttagataaggtaacttatatagatgaaataagagaagaa
gttcttaaaatggttaaaaaagaacttttaacagaagaagaaggaaaagtagtaaatgta
tttaaaatacaaaaattctttaaaagtgaattaggacagagaatgttaagctcatataaa
tctggcaaaaaggtatatagagaactaccatttataactgagattccaagcagtattata
gaaaaaaatcttgatcctaaaatctatggagaggaaaaagtaagattgcaaggtattata
gatgccttctttgaggaagaggatggatatgttcttttagattataaaactgattatgtt
aaagagggagaggaagaggccttcataaataaatacaaaattcaaattaacttatataag
gacacattaaataaaattttaggggaagaagttaaggaagcttatctgtattccttctat
cttgaaaaagaattaaaaataagcaaggaataa
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