Clostridium perfringens SM101: CPR_0055
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Entry
CPR_0055 CDS
T00379
Symbol
dnaX
Name
(GenBank) DNA polymerase III, gamma and tau subunits
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
cpr
Clostridium perfringens SM101
Pathway
cpr03030
DNA replication
cpr03430
Mismatch repair
cpr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cpr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CPR_0055 (dnaX)
03430 Mismatch repair
CPR_0055 (dnaX)
03440 Homologous recombination
CPR_0055 (dnaX)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cpr03032
]
CPR_0055 (dnaX)
03400 DNA repair and recombination proteins [BR:
cpr03400
]
CPR_0055 (dnaX)
Enzymes [BR:
cpr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CPR_0055 (dnaX)
DNA replication proteins [BR:
cpr03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CPR_0055 (dnaX)
DNA repair and recombination proteins [BR:
cpr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CPR_0055 (dnaX)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNA_pol3_gamma3
DNAX_ATPase_lid
AAA
AAA_22
DNA_pol3_delta_C
RuvB_N
DUF815
AAA_30
AAA_19
AAA_18
AAA_24
Mg_chelatase
EF-hand_1
AAA_assoc_2
Motif
Other DBs
NCBI-ProteinID:
ABG87544
UniProt:
Q0SWS8
LinkDB
All DBs
Position
60816..62459
Genome browser
AA seq
547 aa
AA seq
DB search
MAYKALYREWRPQTFNDVVGQEHITTTLKNQIINERTAHAYLFCGTRGTGKTSTAKVMAK
ALNCLDLKDGEPCNQCEMCKKINEGLAIDITELDAASNNGVDNIRDIIDDVQYPPQEARF
KVYIMDEVHMLSIGAVNAFLKTLEEPPKNVVFILATTDPQKLPITILSRCQRFDFKRISR
KDITGRLRKIVTEQGIFCDDKSLDLVARVSDGAMRDSLSILDQAISIGDGKVDYDELVSM
LGLVTNDNLFKIVDSIIKRDIESAMEIIEELVLTGKDMTLFIKDLIVHYRNLLMIKVTSN
PEEVLDTAEENIEKLKVQGAKLKVEEIMRCIRIVQECDEEAKLSKQARVYLELAVIKMCK
IEYDTSKEVMLARINKLEQAIRSGNIQVNTNLEEVKSQVSNEASNNKTLNNKQQNVIKSS
NNYEVVNENSTLTPEYLRKVWKDILETFKSRGKYMVYIALAKGISKVSCNKGVVEFRYTY
EYRHNKERLEKHDFSKIVNDIFSEVLKEPVRVVYSVEQGTEEEKAEEADLEARLSGIMGD
GLEIVEE
NT seq
1644 nt
NT seq
+upstream
nt +downstream
nt
ttggcatataaagctttgtatagagagtggagaccacaaacctttaatgatgttgtaggt
caagaacatataaccactacattaaaaaatcagataataaatgaaagaacagctcatgca
tatttattttgtggtactagaggaactggtaaaacttctacagctaaggtaatggctaag
gctttaaactgtttagatttaaaagacggagagccttgtaatcagtgtgagatgtgtaaa
aaaataaatgaaggattagcaatagatataactgaacttgatgcagcttcaaacaatggg
gtagataacataagggatataattgatgatgttcaatatccaccacaagaagctagattt
aaagtttacataatggatgaggttcacatgctttctattggggcagttaatgctttttta
aagactttagaagagccaccaaagaatgtagtcttcattttagctacaacagatcctcaa
aaattacctataactatattatcaagatgtcaaagatttgacttcaaaaggattagtaga
aaagatataacaggaagattaagaaaaatagttactgagcaagggatattctgtgatgat
aaaagtttagatcttgttgcaagagtatctgatggagctatgagagattccttaagtata
ttagatcaagctatttctataggggatggtaaggtagattatgatgaattagtttctatg
ttaggacttgtaactaatgataatttatttaaaatagtggattctataataaaaagagat
atagaaagtgctatggaaataatagaagaattagttcttacaggaaaggatatgactctt
ttcataaaggacttaatagttcattatagaaacttgcttatgataaaggtaacttcaaat
ccagaggaagttttagatactgctgaggaaaatatagaaaaacttaaagtgcaaggtgct
aagttaaaggttgaagaaatcatgagatgcataagaattgtgcaagaatgtgatgaagag
gctaaacttagtaaacaggctagagtttatttagagcttgcagtaataaaaatgtgcaaa
atagagtatgatacatctaaggaagttatgctagcaagaataaataagttagaacaagca
ataagaagtggaaatatacaggttaatactaatttagaagaggttaaatcacaagtttca
aatgaagcttcaaataataaaactttaaataataaacaacagaatgttataaaaagttca
aataattatgaagtggtaaatgaaaattcaaccctaacaccagagtatttaagaaaggtt
tggaaagatatacttgaaacttttaagagtagaggaaagtatatggtttatatagcctta
gcaaagggtataagcaaagtttcttgcaataaaggtgttgttgaatttagatatacttat
gaatatagacataataaagaaagacttgaaaaacatgatttctctaaaatagtaaatgat
atattttcagaagttttaaaggaacctgtaagagttgtatatagtgttgaacaaggaaca
gaagaggaaaaagctgaggaagctgatttagaagctagactttcaggtattatgggtgat
ggtctagaaatagttgaagaatag
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