Entry |
|
Name |
(GenBank) putative nuclease SbcCD, D subunit
|
KO |
K03547 | DNA repair protein SbcD/Mre11 |
|
Organism |
cpr Clostridium perfringens SM101
|
Brite |
KEGG Orthology (KO) [BR:cpr00001]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:cpr03400]
CPR_0204
DNA repair and recombination proteins [BR:cpr03400]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
CPR_0204
Archaeal homologous recombinant proteins
CPR_0204
|
SSDB |
|
Motif |
|
Other DBs |
|
LinkDB |
|
Position |
254146..255369
|
AA seq |
407 aa
MRILHTADWHLGKNLEGLSRMDEQERFLEDFVHIVKDNNIDLVIIAGDVYDSSNPPARAE
KMFYDTLKKISANGERMTLVISGNHDNPERLVAAGPLARDHGIIMVGTPKSIVEVGEYGR
NKVLNSGEGFIELDINGEKSVILTVPYPSEKRLNEVLYGAMDETCERIKSYSDRIKLLFD
SLKGNFKEDTINLVVSHLFATGAENTGSERNIELGGSFIVDKECFPEEAQYIALGHIHKP
MILPGTNKKIRYAGSPLQYNKKEISFEKKCFIVDVKANEEANIDEIKFDVYKPIEVWKCD
SIDEAIYKCEENKDRECWVYLEIKTDRYIREDEIKAMKKLKGDIIEIIPKITLDEEENDE
RSFSEKSFEELFTDFYEKERGVKPEEDLLELLLNIVKEEGDEENETN |
NT seq |
1224 nt +upstreamnt +downstreamnt
atgaggatacttcacactgctgattggcatttaggaaagaacttagaaggattaagtcgt
atggatgagcaagaacgatttttagaggattttgttcacatagtaaaagataataatata
gatttagttattatagcaggggatgtatatgattctagtaatcctccagctagggcagaa
aaaatgttttatgataccttaaaaaagatatcagctaatggagaaaggatgactttagtt
atttcaggaaaccatgataatccagaaagattagtggctgcagggcccttagcaagagac
catggaataatcatggttggaactcctaagagcatagttgaagtaggggaatatggaaga
aataaagttttaaattcaggagaaggatttattgaattagatataaatggagaaaagtct
gtaatattaactgttccatatccaagtgaaaagagattaaatgaagttttatatggtgca
atggatgaaacttgtgagagaataaaaagttatagtgatagaataaagcttttatttgat
tcacttaaaggaaattttaaagaagatacaattaatttagtggtatctcatctttttgca
acgggagcagaaaatactggttcagagagaaatatagagcttggaggaagttttattgtt
gataaggaatgtttcccagaagaagctcaatatattgctttagggcatattcataagcct
atgattctaccaggaactaataaaaagataagatatgcaggttcaccacttcaatacaat
aaaaaagaaataagctttgaaaaaaagtgttttattgtagatgttaaagcaaatgaggaa
gcaaatatagatgaaataaaatttgatgtgtacaagcctatagaagtttggaagtgtgat
agcatagatgaagctatttacaaatgtgaagagaataaagatagagaatgttgggtttat
ttagagataaaaacagatagatatataagagaagatgaaataaaggctatgaagaagctt
aaaggggatattattgaaattattcctaagataacactagatgaagaggagaatgatgaa
agaagtttttcagaaaaatcttttgaagaattattcactgacttttacgaaaaggaaaga
ggggttaagccagaggaagatttattagagcttttacttaatatagttaaagaggaaggg
gatgaagaaaatgaaaccaattaa |