Clostridium perfringens SM101: CPR_0205
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Entry
CPR_0205 CDS
T00379
Symbol
sbcC
Name
(GenBank) exonuclease SbcC
KO
K03546
DNA repair protein SbcC/Rad50
Organism
cpr
Clostridium perfringens SM101
Brite
KEGG Orthology (KO) [BR:
cpr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cpr03400
]
CPR_0205 (sbcC)
DNA repair and recombination proteins [BR:
cpr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
CPR_0205 (sbcC)
Archaeal homologous recombinant proteins
CPR_0205 (sbcC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SbcC_Walker_B
AAA_23
AAA_29
Amnionless
SMC_N
ABC_tran
Motif
Other DBs
NCBI-ProteinID:
ABG87480
UniProt:
Q0SWG0
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All DBs
Position
255356..258874
Genome browser
AA seq
1172 aa
AA seq
DB search
MKPIKLEVKGLNSFIDKQVVEFDKLTERGLFGIFGPTGSGKSTILDGITLALYGDIARKS
SNYINTNCDGVYVSYEFQITGNEVKRYRVDREFKRDNKSGGIRNKSSKIIDITGGVENVL
EEKAKAVTSKCEEIIGLKLDDFMRTVVLPQGKFSEFLKLEGKERRNMLERLFNLRKYGDD
LSSKLSLEIRKEKDKMNVLEGQLKGYEGVSEEALKAKEEEINEINLSIKSKEELLNKIKK
EFEEAEKVWNTQKELYDKRIEEESLVSRSEEIKSFKERVEISNKADKVIVFINNLEEILK
EINKEDLKFNELNKKLEELTNLREENKLKFEEVSKKKEEKLPDLRLKKEKLLESQKERDI
LFQIKADGVKLKEACKKIFEDRSKCDTKLNSIEENEKRLNEELKEKEERKEELFVHEEFK
NKINSGLFILSSYEGLDKQFNEIKSEEIELKKYIKNLTEDKEKSEKDLKVKIESLSKTRD
KLESLLKKTPGDSNSILEKQIKLGEYREKLNKYKEIKNSLEESLKSKNNFEEKLKAFENQ
KLLLEKEVRELKEYINKVKVEELAHKLRENLVDGECCPVCGSTHHELNKVEKINLEESNE
KTTLLESKEEKLKELILEFSKIEATLEYENKKIEELNISIEEVGEVNEERLKSLEEEFNT
LKEKVEEFNLKKENLEKDLEKLKEEKNNLENIFNKAEVILCEKIVREKEIASKIKEVDKE
LKLKNSELNSIKNELKIEDIKLENELILKKEKEKNLLEKEIRILRTQLEESNKIKDELRE
KRDALKEDYLSQKSLLDGKVEVYREKERMIKGSLKGLIDEALPIEKIDIKGLLEDLQLEI
DYIEKAYLNLSEEKEKLEKAFNNMNQEVAVTKERVNSLNLRKENEEKKVNLALEEEGFKT
ILEVKEGILSKDEKEKLKTLIEEYDNNLIKVRANIELLIKKLNGKSLTEEEWTRVLQEKN
NTEKELKEVEELKIRLVTENESIKKKLEEQRDILHIKAKQEHKLALLSDLEKLFKGKKFV
EFIAANQLKYISIEASKKLKDITNGVYGLEVDENGKFIIRDYKNGGAKRDASTLSGGETF
LASLALALSLSSQIQLKGTAPLELFFLDEGFGTLDDNLLDVVMNSLERLHHERLSVGIIS
HVESIKNRVPVKLILTPAEAGIGGSKVKIERS
NT seq
3519 nt
NT seq
+upstream
nt +downstream
nt
atgaaaccaattaagctagaggttaagggattaaatagttttatagataagcaagttgtt
gaatttgataagttaacagagagagggctttttggtatttttggacctactggaagtgga
aaatctacaattctagatggaataacccttgctttatatggtgatattgcaagaaaaagc
tcaaactatataaatactaactgtgatggcgtctatgtaagttatgagtttcaaataaca
ggtaatgaagtaaaaaggtatagagttgatagggaatttaaaagagataataaaagtggc
ggaataagaaataaaagttcaaagataattgatataacaggcggagttgaaaatgtacta
gaggaaaaggcaaaggctgtaacttcaaagtgtgaggaaattatagggttaaaattagat
gattttatgaggactgttgttctgccacaagggaaatttagtgagtttcttaagctagaa
ggaaaagagagaagaaatatgcttgagagattatttaatcttagaaaatatggggatgat
ctttctagtaagcttagtttggaaataagaaaagaaaaagataagatgaatgtcttagaa
ggacaattaaaggggtatgaaggagttagtgaagaagctttaaaagcaaaggaagaagaa
attaatgaaatcaacttaagtattaaaagtaaagaagagttattaaataagataaaaaaa
gaatttgaggaagcggaaaaagtttggaatactcaaaaagaactttatgacaaaagaatt
gaagaagagagtttagtaagtagaagtgaggaaataaaatcttttaaagaaagagttgaa
atttcaaataaggcagataaggtaatagtatttataaataatcttgaagaaattttaaag
gaaataaataaagaggatttaaaatttaatgagttaaataagaaattagaggaacttaca
aatttaagagaagaaaataagctaaagtttgaagaggtttctaaaaagaaggaagaaaaa
ttacctgacttaagattaaagaaggaaaaattattagaaagccaaaaggaaagggatata
ctttttcaaataaaggctgatggggttaaattaaaggaagcttgtaagaagatttttgag
gatagaagtaaatgtgatactaaattaaattctatagaagaaaatgaaaagagattaaat
gaagaattaaaagagaaggaagagagaaaagaagagctttttgtacatgaagaatttaaa
aataagattaatagtggattatttattttaagttcttatgaaggcttagataaacaattt
aatgagataaagagtgaagaaattgaattgaagaaatatataaaaaatcttacagaggat
aaagaaaagtcagagaaggatttaaaagtaaagatagaaagtttaagtaagacaagggac
aaactagaaagtcttttaaagaaaacaccaggggatagtaattctattttagaaaaacaa
ataaaacttggagagtatagagagaagcttaataaatataaagagataaaaaattcttta
gaagagtccttaaagagtaaaaataattttgaagaaaaacttaaagcttttgaaaatcaa
aaattattattagaaaaagaggtaagagagcttaaggagtatataaataaggttaaggtt
gaagagttagctcataaacttagggagaacttagtagacggagaatgttgtccagtttgt
ggatcaactcaccatgaacttaataaggttgagaaaattaatttagaggaatcaaatgaa
aaaacaactttattagaaagtaaggaagaaaagttaaaagaacttattttagagttctca
aaaatagaagctaccttagaatatgaaaataagaaaattgaggaattaaatatttccata
gaagaagtaggagaagttaatgaggaaagattaaaatccttagaagaagagtttaatact
ttaaaagagaaggtagaggagtttaatcttaaaaaagaaaatctagaaaaagatttagaa
aaattaaaggaagaaaagaataatttagaaaatatcttcaataaggctgaggttatttta
tgtgaaaaaatagttagagagaaagaaatagcttcaaagataaaggaagtagataaggag
ttaaagttaaaaaattctgagcttaattccataaaaaatgaactaaagattgaggatatt
aagctagagaatgagttgatattaaaaaaagagaaagaaaaaaatctattagagaaagag
attagaatattaagaactcagctagaagaatcaaataagataaaggatgaattaagagaa
aaaagagatgcattaaaggaggattatttaagtcaaaaatccttactagatggtaaagta
gaagtttatagagaaaaggaaagaatgattaaaggatctttaaagggcttaattgatgaa
gctttacctattgaaaaaatagatataaaaggcttattagaagatttacaattagagatt
gattatatagaaaaggcttatttaaatctaagtgaggaaaaagaaaaactagaaaaagcc
tttaataatatgaatcaagaggtagctgttactaaggaaagagttaattcattaaatctt
agaaaagaaaatgaggagaaaaaagtaaacttagctttagaggaagaaggatttaagaca
atattagaggttaaagaaggtattttatctaaggatgaaaaggaaaaattaaaaacatta
attgaagaatatgataataacttgattaaggttagagcaaatatagaattattaattaaa
aagttaaatggaaagagtttaacagaagaagaatggacaagggttcttcaagagaaaaat
aatactgaaaaagaattaaaggaagttgaagaattaaaaattagacttgttactgaaaat
gagtctataaagaaaaaacttgaagaacaaagggatatacttcatattaaagctaaacaa
gaacataagcttgctcttttaagtgatttagaaaaattatttaaaggaaagaagtttgta
gaatttattgcagcaaatcaattaaaatatatatccatagaggcctctaaaaagcttaag
gatataactaatggagtttatggattagaggttgatgaaaatggtaagtttataataaga
gattataaaaatggaggtgctaagagagatgcctcaactctttcagggggagaaactttc
ctagcttccttagccttagcattatcactttcatcacaaattcagttaaaaggaacagcc
cctttagaattattcttcttagatgagggctttggaactttagatgataatcttttagat
gtggttatgaattccttagaaagacttcatcacgaaagactatctgttggtataataagc
cacgttgaatctataaaaaacagagttccagttaagcttatattaacaccggcagaggca
ggaataggtggaagcaaggttaaaatagagagaagttaa
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