Clostridium perfringens SM101: CPR_0495
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Entry
CPR_0495 CDS
T00379
Name
(GenBank) ABC transporter, permease/ATP-binding protein
KO
K18888
ATP-binding cassette, subfamily B, multidrug efflux pump
Organism
cpr
Clostridium perfringens SM101
Pathway
cpr02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
cpr00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
CPR_0495
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cpr02000
]
CPR_0495
Transporters [BR:
cpr02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
CPR_0495
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
AAA_21
AAA
AAA_22
AAA_15
ABC_membrane_3
SMC_N
AAA_14
Zeta_toxin
AAA_23
AAA_30
nSTAND3
DUF87
TsaE
AAA_29
AAA_24
AAA_16
AAA_18
AAA_28
DO-GTPase2
Rad17
ABC_membrane_2
zf-C2H2_jaz
Proton_antipo_N
Motif
Other DBs
NCBI-ProteinID:
ABG86247
UniProt:
Q0SVM7
LinkDB
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Position
588221..590077
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AA seq
618 aa
AA seq
DB search
MSKERKGGMGGPMGRMGGGPRAVEKAKDFKGTMKKLGVYLKPYSLSIAIVILFAIGSAAF
SIVGPKILGKATTKIFEGLVQKITGVPDASIDFGYIGNIAMILVALYLVSSLFGIIQSFI
MSGVAQKVSYNLRKQISEKMDTLPLNYFDTRTNGEVLSRITNDVDTVNQTLNQSLSQIIT
SVVTLIGVLIMMFSISWIMTLATFIILPVSMVLISLVVKKSQKYFKSQQEYLGHLNGQIE
EVYGGHNIMKAFNREEASTKDFDELNNTLYKSAWKSQFLSGMMMPIMSFVGNLGYVLVSI
LGGWLTIKSVITVGDIQAFIQYVRSFNQPISQMAQVANIMQSTAAAAERVFEFLDEEDEV
KDPVNSVDPSEIRGEVEFEDVHFGYNEDKIIINDFSVDVKPGQKVAIVGPTGAGKTTIVK
LLMRFYDINSGSIKIDGHDIRDFKRADLRNLFGMVLQDTWLFNGTIMENLRYGRLDATDA
EVKEAAKAAHVDHFVKTLPDGYNMVLNEDASNISQGQKQLLTIARAFLKDPKLLILDEAT
SSVDTRTELLIQKAMEKLMEGRTSFIIAHRLSTIRDADLILVMKDGDIVEQGNHEELLEK
GGFYSSLYNSQFEQNSAS
NT seq
1857 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaagaaagaaaaggcggaatgggtggcccaatgggtagaatgggcggaggccca
agagccgttgaaaaagcaaaagattttaaaggaacaatgaaaaagcttggggtttattta
aaaccctatagtttatctatagctattgtaatattatttgctataggaagtgctgccttc
tcaattgtaggacctaagattttaggtaaagctactacaaaaatatttgaaggtttagtt
caaaagataacaggggtaccagatgcttctatagattttggatacattggaaatatagca
atgattttagtagctctatacttagtaagttcattatttgggattatacaatcttttata
atgtcaggagttgctcaaaaggtttcttataacttaagaaagcaaatatcagaaaaaatg
gatactttacctcttaattattttgatacaagaacaaatggagaggttttatcaagaatt
acaaatgacgttgatacagtgaaccaaactttaaatcaaagtttatcacagataataact
tcagtggttactttaattggtgtattaataatgatgttctcaataagttggattatgact
ttagcaacatttataatacttccagtttcaatggttcttatatctttagttgttaagaaa
tctcaaaaatactttaaatctcaacaagaatacttaggtcatcttaatggtcaaatagaa
gaggtttatggtggacacaatataatgaaagctttcaatagagaagaagcttcaactaaa
gactttgatgaattaaataatactttatataaatcagcttggaaatctcaattcttatca
ggtatgatgatgccaatcatgtcttttgtaggaaacttaggatatgttttagtttcaata
cttggtggatggttaacaattaaaagtgttataacagttggggatatacaagcatttatc
caatatgtacgttcatttaaccaaccaatatctcaaatggctcaggttgcaaatataatg
caatcaacagcggccgctgctgagagagtatttgaattcttagatgaagaggatgaggtt
aaagatccagttaattcagtagatccttcagaaataagaggagaagttgaatttgaagat
gttcactttggatataatgaagataagataataataaatgatttctcagtagatgttaaa
ccagggcaaaaggtggctattgttggacctacaggagcaggtaaaactacaatagttaaa
ttattaatgagattctacgatataaatagtggaagtattaagattgatggtcatgatata
agagactttaagcgtgctgatttacgtaacttatttggtatggttcttcaagatacatgg
ttatttaatggaactataatggagaatttacgttatggaagattagatgcaactgatgct
gaggttaaagaagctgctaaggctgcccatgttgatcattttgtaaaaactttaccagat
ggatataatatggtcttaaacgaagacgcaagtaatatatcacaaggacaaaagcagctt
ttaacaattgctagagctttcttaaaagatcctaagctattaatacttgatgaggctaca
agttcagttgacactcgtacagagcttttaatacaaaaagctatggaaaaacttatggaa
ggaagaacaagctttattatagctcacagactttctactatacgtgatgcagacttaatc
cttgttatgaaggatggagatatagttgaacaaggaaatcatgaagagcttctagaaaaa
ggtggattctattcaagcctttacaatagccaatttgaacaaaatagtgcttcataa
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