Clostridium perfringens SM101: CPR_0566
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Entry
CPR_0566 CDS
T00379
Name
(GenBank) conserved hypothetical protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
cpr
Clostridium perfringens SM101
Pathway
cpr03420
Nucleotide excision repair
cpr03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cpr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CPR_0566
03430 Mismatch repair
CPR_0566
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cpr03400
]
CPR_0566
Enzymes [BR:
cpr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CPR_0566
DNA repair and recombination proteins [BR:
cpr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CPR_0566
MMR (mismatch excision repair)
Other MMR factors
CPR_0566
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
AAA_19
DEAD
UvrD_C
SLFN-g3_helicase
Viral_helicase1
AAA_30
ResIII
UvrD_C_2
zf-C2H2_aberr
AAA_16
AAA_18
Motif
Other DBs
NCBI-ProteinID:
ABG87762
UniProt:
Q0SVF7
LinkDB
All DBs
Position
673573..675693
Genome browser
AA seq
706 aa
AA seq
DB search
MTDKKDIEFLVEEKKLEEVSNILNEEMLSYINKRKFVTQYILDYRKNAVEEYKDDEDKLI
EYFDHERYVKEQAFTTIDKKLKELTILKESPYFGRVTFNDLEFDQKDTLYVGRFGVTPEG
SYEPVIVDWRAPVASLFYHGSLGEASYTSPDGPIKCDIEGRRQIIVKKGELKGVFDSAID
VKDDILQMVLSNNSSDKLKDVIMTIQQEQDEIIRKERTSNIVVNGVAGSGKTTIALHRVA
YLLYNYRKELEDKVLILGPNGIFMEYISQVLPSLGEVGVKQETFASFALKEMDSELYIMS
FDKYLEKILSEDKEFIEDAKYKNSYEIIKDLDNLVKDMDKDYFHVEDVKYFGDLVISKEE
IEEMFNKHYEYMPLFRRSEKIKRIILSKIKDKRDEKVWELNEELRKEKEKLTPEELLIEE
NNLEFRRKLRIREIVKEVMDSRAKLDSWISREDVLDIYDRFNGNKKEYTINDLAPILYLA
IKLEGKKATKDYRHVVIDEAQDYSPLQFKVVRELTGTKYFTVVGDVNQRLIKYSDLAPMM
ELGKIFDDVNPEIYNLNKSYRSTYEIMEYANKYLDEDRIIPIVRHGKPVEEIELHNNEEL
SESIIESLKEFSNEGLESIAIITRDKEELEKVYNLISNKVHLVKFDNEDVLYKGGNVIIP
SYFAKGLEFDGVIIVDNGSSKDENEDLIKYIMSTRALHRLKEIQFK
NT seq
2121 nt
NT seq
+upstream
nt +downstream
nt
atgactgataaaaaagatatagaatttttagttgaagagaaaaaattagaggaagtttct
aatatattaaatgaagaaatgctttcatatataaataaaagaaaatttgtaacacaatat
atattagattatagaaaaaatgcagttgaagaatataaagatgatgaagataaattaata
gagtactttgaccatgaaagatatgtaaaagaacaagcctttactacaatagataaaaaa
ttaaaggaattaacaatcttaaaggaatcaccttactttggaagagttacttttaatgat
ttagagtttgatcaaaaggatactttatatgttggtagatttggagtaactccagaggga
agctatgagcctgtaatagtagattggagagcacctgtggcttcacttttttatcatggt
agtttaggagaagcaagttatacatcaccagatggacctataaaatgtgatatagaaggt
agaagacagattatagttaaaaaaggagaattaaagggagtttttgattcagccatagat
gtaaaagatgatattttacaaatggttctaagtaataacagttctgataagcttaaagat
gtaataatgacaatccaacaagagcaagatgaaatcataagaaaagagagaacttctaat
atagttgtaaatggagtagcaggtagtggtaaaactacaatagcacttcatagagtagca
taccttttatataactatagaaaagaattagaggataaagttcttatcttaggaccaaat
ggtatatttatggagtatatttcacaagtattacctagtcttggggaagtaggagtaaaa
caggagacttttgctagttttgctttaaaagaaatggatagtgaattatacataatgagt
tttgataagtatttagaaaaaatactttcagaggataaagagtttatagaggatgctaaa
tataaaaattcatacgagataattaaagatttagataacctagtaaaagatatggataag
gattatttccacgttgaagatgtaaaatactttggtgatttagttatttcaaaagaagaa
atagaagaaatgtttaataaacattatgagtatatgcctttattcagaagaagtgaaaaa
attaagagaataatattatctaagataaaagataagagagacgaaaaagtttgggagctt
aatgaagaattaagaaaagaaaaggaaaaattaactcctgaagaacttttaattgaagaa
aataacttagaatttagaagaaaattaagaataagagaaattgttaaggaagtaatggat
tcaagagctaagttagatagttggatttcaagagaagatgttttagatatctatgataga
ttcaatggaaataaaaaagaatatacaataaatgatttagcaccaatattatacttagca
ataaaattagaaggtaaaaaagcaacaaaggattatagacatgtggttatagatgaagct
caagattattcaccacttcaatttaaggttgtaagagaattaacaggaactaagtatttt
actgttgtgggagacgtaaatcaaagacttattaaatattcagacttagctcctatgatg
gaactaggaaaaatatttgatgatgtaaatccagagatttataacctaaataaaagttat
agaagtacttatgaaataatggaatatgcaaataaatatcttgatgaagatagaataatt
cctatagttagacatggtaaaccagttgaggaaattgaattgcataataatgaggaactt
tcagaaagcattattgagtctttaaaagaattttcaaatgaaggcttagaaagtatagct
attataacaagagacaaagaagagttagaaaaggtgtataatcttataagcaataaagtg
catttagttaagtttgataacgaagatgtattatataaagggggaaatgttataatacca
tcttactttgcaaagggattagaatttgatggggttattattgtagataatgggtcatca
aaggatgaaaatgaagatctaataaaatatataatgagtactagagctcttcatagatta
aaagaaatacaatttaaataa
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