Clostridium perfringens SM101: CPR_1146
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Entry
CPR_1146 CDS
T00379
Name
(GenBank) AP endonuclease, family 2 protein
KO
K01151
deoxyribonuclease IV [EC:
3.1.21.2
]
Organism
cpr
Clostridium perfringens SM101
Pathway
cpr03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
cpr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
CPR_1146
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cpr03400
]
CPR_1146
Enzymes [BR:
cpr01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.2 deoxyribonuclease IV
CPR_1146
DNA repair and recombination proteins [BR:
cpr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
CPR_1146
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AP_endonuc_2
UvdE
Amidohydro_1
Motif
Other DBs
NCBI-ProteinID:
ABG86829
UniProt:
Q0STT9
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All DBs
Position
complement(1290948..1291766)
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AA seq
272 aa
AA seq
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MEKLLFGISGLPIGEEGQKFNYSTGIEYLKKIGLEAMELPFVRSVNVTAKNREKIIEAKE
KNDFYLSAHGSYFINLNAEEEEKKEKSIERILKGAEALKSVGGRSLVFHPGFYLKASKEE
ALKEIKKNLKKLPYEGVDYRLETTGKGTQFGNLQELVDICKEVPSCKLCIDFSHIHARGI
GALKEYKDFAEILEYIKDNLGNEALEDLHIHMSGIHYTDKGERNHLPFLESDFNFIECLR
ALKDYKVKGCIICESPLLEKDALLLKETYEKL
NT seq
819 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaacttttatttggaatttcaggtttaccaataggtgaagagggccagaaattc
aattactcaacaggaattgaatacttaaaaaaaataggactagaagctatggagcttcct
tttgttagatccgttaatgttacagctaaaaacagagaaaaaataatagaagctaaagaa
aaaaatgatttttatctttcagctcatggttcttattttataaatttaaatgctgaagaa
gaggaaaaaaaagaaaaatctattgaaagaatacttaaaggtgctgaagcattaaaaagt
gttggaggtagaagcttagtattccatccaggattttatttaaaagcctcaaaagaagaa
gctttaaaggaaataaagaaaaacttaaagaaattaccttatgaaggtgtagattataga
ttagaaactacaggtaagggaactcaattcggaaacctacaagaattagttgatatatgt
aaagaagtgccatcttgcaaattatgtattgatttttctcatatacatgctagaggaatt
ggtgctttaaaagaatataaagatttcgcagaaattttagaatatataaaagataattta
ggaaatgaagccttagaagatttacatattcatatgtctggaattcactacacagacaaa
ggggaaagaaaccacttaccttttttagaaagtgattttaactttattgaatgcttaagg
gcacttaaggattataaagtaaagggatgtataatatgtgaaagtcctctcttagaaaaa
gatgccttattactaaaagaaacttatgaaaaattataa
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