Clostridium perfringens SM101: CPR_1394
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Entry
CPR_1394 CDS
T00379
Name
(GenBank) exonuclease family protein
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
cpr
Clostridium perfringens SM101
Pathway
cpr03030
DNA replication
cpr03430
Mismatch repair
cpr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cpr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CPR_1394
03430 Mismatch repair
CPR_1394
03440 Homologous recombination
CPR_1394
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cpr03032
]
CPR_1394
03400 DNA repair and recombination proteins [BR:
cpr03400
]
CPR_1394
Enzymes [BR:
cpr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CPR_1394
DNA replication proteins [BR:
cpr03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CPR_1394
DNA repair and recombination proteins [BR:
cpr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CPR_1394
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
BRCT
DEDDh_C
HBB
Motif
Other DBs
NCBI-ProteinID:
ABG85991
UniProt:
Q0ST44
LinkDB
All DBs
Position
complement(1565474..1566382)
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AA seq
302 aa
AA seq
DB search
MDFVAIDFETANEKRNSACSIGLTVVKDNKIVEEKYFLIKPCEMRFQPMNIWIHGIRPED
VENERTFNEIWKEIKDYIDGNLVIAHNAAFDISVLRKTLDFYDIPYPDFEYACTVVMAKN
YYKSLPNHKLGTVSEALGFEFSHHHAGEDARACANILLNICKDLDIESIEELSDKLAIRI
GAVYENGYKSSGRKGECKYSSNLRLKEKKKEGEISLKCKNVVFTGPLSSMSRGEAIGNVI
RCGGFVSSSVSKKTNYLVTGIRDLSELKENEKSIKLKKAENLIKENFDIKIINEEEFLSI
IE
NT seq
909 nt
NT seq
+upstream
nt +downstream
nt
atggattttgttgcaatagactttgaaactgctaatgagaaaagaaatagtgcgtgttct
attggattgactgttgttaaggataataaaattgttgaagaaaaatattttttaataaag
ccttgtgaaatgagatttcagcccatgaatatatggatacatggaattagaccagaggat
gttgaaaatgagagaacttttaatgaaatatggaaagaaataaaggattacatagatgga
aatttagtaatagctcataatgcagcttttgatattagcgttcttagaaaaactttagat
ttttatgatataccttatccagactttgagtatgcttgtacagtagttatggcaaagaat
tattataaatcattaccaaatcataaattaggaactgtaagtgaagctttaggctttgaa
ttttctcatcaccatgcaggggaagatgcaagggcttgtgctaacatattacttaatata
tgcaaagatttagatatagaatcaattgaagagctttcagataagcttgccataagaatt
ggtgctgtttatgaaaatggatataaatcttctggaagaaagggagaatgcaaatattca
agtaatttaagacttaaggaaaagaagaaagagggagaaatatctttaaaatgtaaaaat
gtagtttttacaggacctttaagttctatgtctagaggagaagctataggaaatgtaata
agatgtggtggatttgtttcaagttctgtaagtaaaaagacaaactacttagttacagga
attagggatttaagtgaattaaaggaaaatgaaaagagtattaaattaaaaaaagcagaa
aatttaataaaagaaaattttgatattaagataataaatgaagaggagtttttatctata
atagaataa
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