Clostridium perfringens SM101: CPR_1591
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Entry
CPR_1591 CDS
T00379
Name
(GenBank) ATP-dependent DNA helicase, UvrD/REP family
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
cpr
Clostridium perfringens SM101
Pathway
cpr03420
Nucleotide excision repair
cpr03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cpr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CPR_1591
03430 Mismatch repair
CPR_1591
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cpr03400
]
CPR_1591
Enzymes [BR:
cpr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CPR_1591
DNA repair and recombination proteins [BR:
cpr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CPR_1591
MMR (mismatch excision repair)
Other MMR factors
CPR_1591
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
AAA_19
AAA_11
DEAD
UvrD_C_2
AAA_30
ResIII
SLFN-g3_helicase
NACHT
Fe-ADH
Motif
Other DBs
NCBI-ProteinID:
ABG85471
UniProt:
Q0SSK0
LinkDB
All DBs
Position
complement(1778358..1780649)
Genome browser
AA seq
763 aa
AA seq
DB search
MSDNKILTYEREVLSETKRWIESEEERLEGEKLKANEKLDALNKKSKGAYDPEIEIVKKS
VDFLSKEEEKFKEAYNKPYFARIDFREYRKDFESFYIGKCGLGDMLEGEEKVIDWRAPLA
DLYYSGTQGEAYYKAPIGVIEGELSLKRKFLFDHEHNLKECFDEGINEIILKSGLNEEGD
GLIDEFLRINLENSTGTKLKDVVATIQKEQNDIIRAPKNSPLIIQGSAGSGKTTVALHRL
AYLLYRYKETITGEDILVVAPNKIFLDYISEVLPNLGVDKVEQKTFEELALKKLGIKGKV
ITKDKKLVEILENDLEKNKYIMNDSKIKGSILFKEMLDRYIQILEREDSHIDNIRICGYS
VFDSKEIKRLFLKDLIKYPVNKRKDEIKNYFSKKLGEKVSKVLDKVDFQYEYKIARLKKS
MEDSKERREKLIELYDERDNHKKEIKKSARKEFNEYFNRWKGIDTTNVYKNFFENKEIFN
EVTGGKIPDKLAEYMRENLANNIDKKIIDSDNLAAMLYLKFRIEGIEESSLLKHIVIDEA
QDYSMLQLYVMSMIASGKSLTIVGDIGQGIYSFKGINDWKEAIKLVYDENAEYKHLSQSY
RSTVEIINYANKVLVKQNTYEEPAKPVLRHGMVPEEIEFNNAKEFCERLDNIVKKVKDEG
KTSIAIVGKTLDECKKIRNLVKKYSNYDFELIKDDQKEFDLNLIIIPSYLTKGLEFDCTI
VYNLNKENYNDNEIDKKLLYVVLTRALHYEYIFYKEEKSPLIG
NT seq
2292 nt
NT seq
+upstream
nt +downstream
nt
atgagtgataataagattttaacttatgagagagaagtcctttcagaaactaaaaggtgg
attgaaagtgaagaggaaagattagaaggtgaaaagttaaaagctaatgaaaaactagat
gctttaaataagaaatctaagggagcatatgatccagaaatagaaatagttaagaagtct
gtagactttttatcaaaggaagaagaaaagtttaaagaagcttataataagccatacttt
gcaagaatagattttagggaatatagaaaagattttgaaagtttttatataggtaaatgc
ggacttggagatatgctagaaggagaagaaaaggtaatagattggagagcacccctagct
gatctttattatagtggtactcaaggagaggcatattataaggcacctattggagttatt
gagggtgagcttagtttaaagagaaaatttctttttgatcatgagcataacttaaaggag
tgttttgatgagggaattaatgaaattattttaaaatctggtcttaatgaagaaggggat
gggttaatagacgaattccttagaattaatttagaaaatagcacagggactaaattaaag
gatgtagtagctactatacaaaaagagcagaatgatataataagagcacctaaaaattca
cctttaataatacaagggtcagcaggttcaggaaaaaccactgtagcacttcatagactg
gcttatttattatatagatataaggaaaccataactggagaagatattttagttgtagcg
ccaaataaaatatttttagattatatttctgaagtgttgcctaacttaggagtagataag
gttgaacaaaaaacttttgaggaattagccttaaaaaagttaggtataaaaggtaaagtt
ataactaaggataaaaaattagtagaaattttagaaaatgatttagaaaaaaataaatat
ataatgaatgatagtaaaataaaagggtctatattatttaaagaaatgttagatagatat
attcaaattcttgaaagagaagatagccatatagataatataagaatttgtggatattca
gtttttgattcaaaggagataaaaagattattcttaaaagatttaataaaatatcctgtt
aacaagagaaaggatgaaatcaaaaactatttttctaaaaaattaggagaaaaggtaagt
aaggttttagataaggttgattttcagtatgagtataaaatagctagacttaaaaaaagt
atggaagattctaaggaaagaagagaaaaacttatagagctttatgatgagagagataat
cataaaaaagaaataaaaaagtctgctagaaaagaatttaatgaatattttaatagatgg
aagggtatagatacaactaatgtttataaaaatttctttgaaaacaaggagatttttaat
gaagtaacaggggggaaaataccagataagttagctgaatatatgagagaaaatttggct
aataatatagataaaaaaataatagattcagataacttagcagctatgctttatttaaaa
tttagaatagaaggaatagaggaaagcagcttattaaaacatattgtcattgatgaggca
caggactattctatgctacagttatatgttatgtctatgatagcttcaggaaagtcttta
acaatagttggagatattggtcagggaatatattcatttaaaggaattaatgattggaaa
gaggctattaaattagtttatgatgaaaatgcagagtataagcacttaagccaaagctat
agaagtacagtagagataataaattatgcaaataaggttttagttaaacaaaatacctat
gaagagccagcaaagccagttttaagacatggaatggttccagaggaaattgagtttaat
aatgcaaaagaattttgtgaaagattagataacatagttaaaaaagtaaaagatgaagga
aaaacttcaatagctatagtgggtaaaacccttgatgaatgtaagaagataagaaactta
gttaagaaatattcaaattatgactttgaattaattaaagatgatcaaaaagagtttgat
ttgaacttaataattataccatcatatcttactaaaggattagaatttgactgtactata
gtttataatttaaataaggaaaattataatgataatgaaatagataagaaacttctttat
gtggttttaactagagcgttacattatgaatatatattttataaagaggaaaaatcacct
ttaataggttga
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