Clostridium perfringens SM101: CPR_1652
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Entry
CPR_1652 CDS
T00379
Symbol
pnpA
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
cpr
Clostridium perfringens SM101
Pathway
cpr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cpr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CPR_1652 (pnpA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cpr03019
]
CPR_1652 (pnpA)
03016 Transfer RNA biogenesis [BR:
cpr03016
]
CPR_1652 (pnpA)
Enzymes [BR:
cpr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
CPR_1652 (pnpA)
Messenger RNA biogenesis [BR:
cpr03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
CPR_1652 (pnpA)
Transfer RNA biogenesis [BR:
cpr03016
]
Prokaryotic type
tRNA degradation factors
CPR_1652 (pnpA)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
S1
PNPase
RNase_PH_C
KH_1
KH-I_KHDC4-BBP
EXOSC1
F10E9_4_C
Motif
Other DBs
NCBI-ProteinID:
ABG87059
UniProt:
Q0SSE0
LinkDB
All DBs
Position
complement(1845555..1847663)
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AA seq
702 aa
AA seq
DB search
MNHTHETIIAGRPMKVEFGKLGMLSDAAILMSYGDTVILTNVNASEKPREGIDFFPLSVE
YEERLYSVGKIPGGFIKREGKPSEKAILNGRAIDRPLRPLFPKGYRNDVQVVCTVVSVEN
DNLPEILAINAASMALCLSSIPFTTPVAAVQVGLIGEEFILNPTSKEREESSLQLTVCAT
KERVMMIEAGGDEIPEDTMINAIKFGFDKCQDIIKFQEEAVSMFGKEKKVPELHKVPEEI
EEAVREFAFDMISESMHITDRDERNAAMDEVKAKINEEFEEKYPDNMSDIGEAVYDMQKE
VVRHMLLKEGKRPDGRAFDEVRNIGCEVGLLPRTHGTGLFTRGLTQVMTVATLGAISEIQ
ILDGIGEEESKRYMHHYNFPAYSVGEVRPLRGPGRREIGHGALAERALEPLIPSEAEFPY
TIRLVSEVLSSNGSTSQASVCGSTLALLDAGVPIKRPAAGIAMGLITSKDLTEEEVLTDI
QGLEDFFGDMDFKVAGTEEGITSIQVDTKIKGLSEKVIHDAIYGARKARLMILDKIKECI
PAPREEVSKYAPKTSTLQIDPEKIRDVIGAGGKVINKIIADTGVKIDIKEDGLVYVSSAE
SEGVKEAVKIIEGLTKEVKSGEIYLGKVTKIAQFGAFVEVLPNKEGLVHISKLDNKRVEK
VEDIVSVGDEILVKVTEIDSQGRINLSRKDAIKEAEEENKQQ
NT seq
2109 nt
NT seq
+upstream
nt +downstream
nt
atgaatcatacccatgaaactatcatagcaggaagaccgatgaaagttgagttcgggaaa
ttaggaatgctttcagatgctgctatattaatgagttatggtgatacagtaatattaaca
aatgtaaatgcatcagaaaaaccaagagagggaatagactttttcccactaagtgttgaa
tacgaagagagattatattcagttggtaaaataccaggtggatttataaaaagagaagga
aaaccttcagagaaagctatactaaatggtagagctatagacagacctttaagaccttta
ttcccaaaaggatatagaaatgatgttcaagtagtatgtacagttgtttcagtagaaaat
gataaccttcctgaaatactagctataaatgctgcctcaatggcattatgtttatcaagc
ataccttttactactccagtggctgcagttcaagtaggattaataggagaagaattcata
ctaaaccctacttcaaaggaaagagaagaaagttcacttcaattaactgtttgcgcaact
aaggaaagagttatgatgattgaagctggtggagatgaaatcccagaagatacaatgatt
aatgctatcaaatttggttttgataagtgtcaagatataataaaattccaagaagaagct
gtaagtatgttcggtaaagagaaaaaagtgccagaactacataaagtaccagaagaaata
gaagaagctgtaagagaatttgcttttgatatgattagtgagtcaatgcacattactgat
agagatgaaagaaatgctgcaatggacgaagttaaagctaaaataaatgaagagttcgaa
gaaaaatatccagataacatgtctgatattggagaagcagtttatgatatgcaaaaagaa
gtcgtaagacatatgcttttaaaagaaggaaaaagacctgatggaagagcttttgatgag
gtaagaaacattggttgtgaagttggattacttccaagaactcatggaacaggattattt
acaagaggacttactcaagtaatgactgttgcaactttaggagcaataagtgaaattcaa
atattagatggtattggtgaagaagaatctaagagatatatgcatcactataacttcccg
gcatacagtgtaggagaagttagaccattaagaggacctggtagaagagaaattggtcat
ggagctctagctgaaagagctttagaaccacttataccttcagaagctgagtttccatac
acaataagattagtatcagaagtactaagctcaaatggatctacttcacaggcttcagtt
tgtggtagtacattagcacttttagatgctggggttccaataaagagaccagcagcaggt
atagctatgggattaataacttcaaaagatttaactgaggaagaagttttaactgatatc
caaggtttagaagatttctttggagatatggactttaaggtagctggaacagaagaggga
ataacttcaatccaagtagatactaaaataaaaggtctatcagagaaagttatacacgat
gctatatatggagcgagaaaagcaagattaatgatcttagataagattaaagaatgcata
ccagctccaagagaagaagtttcaaaatatgcacctaagacatcaactctacaaatagat
cctgagaaaatcagagatgtaattggggctggtggaaaagttataaacaagattatagct
gatactggtgttaaaatagatataaaagaagatgggttagtttatgtttcatcagctgaa
tcagaaggtgttaaagaagctgttaaaataatagaaggtttaactaaagaagttaaatct
ggagaaatttatttaggtaaagttacaaaaattgctcaatttggtgcctttgttgaggta
ttacctaataaagaaggattagttcatatttctaagttagataataagagagtagaaaaa
gttgaggatatagtatctgttggagatgaaatattagttaaggtaacagaaatagattct
caaggtagaataaatctttcaagaaaagatgcaataaaagaagctgaagaagaaaataaa
cagcaatag
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