Clostridium perfringens SM101: CPR_1656
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Entry
CPR_1656 CDS
T00379
Name
(GenBank) DHH subfamily 1 protein
KO
K06881
bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:
3.1.3.7
3.1.13.3
]
Organism
cpr
Clostridium perfringens SM101
Pathway
cpr00920
Sulfur metabolism
cpr01100
Metabolic pathways
cpr01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
cpr00001
]
09100 Metabolism
09102 Energy metabolism
00920 Sulfur metabolism
CPR_1656
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cpr03400
]
CPR_1656
Enzymes [BR:
cpr01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.7 3'(2'),5'-bisphosphate nucleotidase
CPR_1656
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.3 oligonucleotidase
CPR_1656
DNA repair and recombination proteins [BR:
cpr03400
]
Prokaryotic type
Other factors with a suspected DNA repair function
Others
CPR_1656
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
DHHA1
MqsA_antitoxin
Motif
Other DBs
NCBI-ProteinID:
ABG86219
UniProt:
Q0SSD6
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All DBs
Position
complement(1849955..1850908)
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AA seq
317 aa
AA seq
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MRFHDVISIINKSKKIGITYHVSPDGDALGSVLALLQGIRIYGKEAYVISKDLVSDNLSF
LPYAEEITGEVIKPSEDTDCVIVLDCGNVERISADLSEFKGTLVNMDHHLSNDKYGVINY
VDTEASATAEIIFMLLKELKVEINENIAKCLYTSLITDTGSFRYSNSTERTHIIAGELVN
YIKHDEIHRNIFDNKPFAKMKLMSLVLGDMELVCNNKIVLMRITKEMIDSIGEEVQNSSD
VVSLGNQIKGVEGCILLKEVDEGVKVSLRSKDTLDVRKIAENFGGGGHTKASGAFIKGVS
IDEAKNKILEILAKEMV
NT seq
954 nt
NT seq
+upstream
nt +downstream
nt
atgagatttcatgatgtaatatcaattataaataaaagcaaaaagattggtataacatat
catgtatctccagatggtgatgccttaggtagtgtcttagcactacttcaaggcattaga
atttatggtaaagaagcttatgttatctctaaagacctagtctcagataacctaagcttt
ctgccttatgctgaggaaataactggagaagttataaagccatcagaagatactgattgt
gttatagtattagattgtggaaatgttgaaagaatttccgcagatttaagcgaattcaaa
ggaactttagttaatatggatcatcatttatcaaatgataaatatggtgttattaactat
gtagatacagaggcttctgcaacagctgaaataatatttatgctacttaaggagttaaag
gttgaaattaatgaaaatatagctaaatgtctatatacatcattaataactgatacaggt
tcttttagatattcaaattctactgaaagaactcatataatagcaggggaattagttaat
tatataaaacatgatgaaattcatagaaatatatttgataataagccttttgctaaaatg
aaactaatgtctttagttttaggagatatggaactagtttgtaataacaaaatagttctt
atgagaattactaaagagatgatagattctattggagaagaagttcaaaatagttcagat
gttgtatccttaggaaatcaaataaaaggtgtagaagggtgcatacttcttaaagaggta
gatgagggagtaaaagttagcttaagatctaaagatacactagatgttagaaaaattgca
gaaaactttggtgggggtggtcatacaaaggcttctggagcattcattaaaggtgtaagt
atagacgaagctaaaaataaaatattagaaatacttgcaaaagagatggtgtaa
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