Clostridium perfringens SM101: CPR_1674
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Entry
CPR_1674 CDS
T00379
Symbol
topA
Name
(GenBank) DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
cpr
Clostridium perfringens SM101
Brite
KEGG Orthology (KO) [BR:
cpr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cpr03032
]
CPR_1674 (topA)
03400 DNA repair and recombination proteins [BR:
cpr03400
]
CPR_1674 (topA)
Enzymes [BR:
cpr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
CPR_1674 (topA)
DNA replication proteins [BR:
cpr03032
]
Prokaryotic type
DNA Topoisomerases
CPR_1674 (topA)
DNA repair and recombination proteins [BR:
cpr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
CPR_1674 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
Zn_ribbon_recom
Toprim_4
Toprim_2
Motif
Other DBs
NCBI-ProteinID:
ABG85645
UniProt:
Q0SSB8
LinkDB
All DBs
Position
complement(1869794..1871896)
Genome browser
AA seq
700 aa
AA seq
DB search
MGQKLVIVESPAKAKTIEKYLGKNYVVEASMGHVRDLPKSQLGVDIENDYNPKYITIRGK
GELLSKLRKLAKKSDKIYLATDPDREGEAISWHLANVLKIDENENCRIEFNEITKDAVKN
SIKHPRKINCNLVDAQQARRVLDRLVGYEISPLLWRNVKWGLSAGRVQSAALKLICDREE
EIKKFNPEEYWTVDVKLKKGKKSFPVKLTTKNKKKIEIKNKEQADQIIDELKENEYIVSK
IKKGTKNKNPLAPFTTSTLQQEASKKLNFMTKKTMSVAQQLYEGVEVKKFGTVGLITYMR
TDSVRISKEAQEKALNFIDETYGKEYVPEEPRVYKGKKNIQDAHEAIRPTYVEITPEIAK
TNLSNDQYKLYALIWKRFIASQMATCILNTNSLEIKNGDYTLRASGSTIKFDGFMKVYEY
ISGEEEESVLLPELEENEVLKEESIEGKQHFTQPPARYSEAAFVKLLEEKGIGRPSTYVP
TISTLISRKYVDREKKILIPTELGFIVNDILSNYFKQIVDTDFTAEMEVKLDNVEAGKES
WTHIVDEFFTPLKEDIEKAEKEISKVIIEDKVSYVPCDKCGRLMVIKHGRFGDFLACPGY
PECQNTKPIVEEVDANCPLCGGKILVKRSKKGNRFYGCSNYPECNFVSWYEPTNEKCPEC
SSYMVKRYSKSKGEYLQCSDKECKYEKIIEKNNDENNSEK
NT seq
2103 nt
NT seq
+upstream
nt +downstream
nt
atgggtcaaaaattagtaattgttgagtcaccagctaaagccaagacaatagaaaaatat
ttaggtaaaaattatgtagtcgaagcttcaatgggacatgtaagagatttgccaaaaagc
caattaggcgttgatatagaaaatgactataatcctaaatatataacaataagaggaaaa
ggtgaacttttaagcaaacttagaaagttagctaaaaaaagtgataagatataccttgca
actgaccctgatagagaaggggaagctatatcttggcacttagctaatgtgcttaagata
gatgaaaacgagaattgtagaatagaatttaatgaaataacaaaggatgcagttaaaaat
tcaataaagcatccaagaaaaataaattgtaatttagtagatgctcagcaagcaagaaga
gtgttagacagattggttggatatgaaataagtccactcctatggaggaatgtaaaatgg
ggattgagtgctggaagggttcagtcagcagcattaaaacttatatgtgatagagaagaa
gaaataaagaagttcaatccagaggagtattggactgttgatgttaaacttaaaaaagga
aagaagtcttttcctgttaagttaacaactaaaaataagaaaaagatagaaataaaaaat
aaagaacaagcagatcaaataatagatgaacttaaagaaaatgaatatatagtaagcaag
ataaaaaaaggaactaagaataaaaatcctttagctccatttactacaagtactcttcaa
caagaggcaagtaaaaagcttaactttatgacaaagaaaacaatgtcagtagctcaacaa
ctttatgaaggggttgaagttaagaaatttggaactgtgggtttaataacttatatgaga
actgattctgttagaatctcaaaggaagctcaagaaaaagctcttaactttatagatgaa
acatatggaaaagagtatgttccagaggagccaagagtatataaaggaaagaaaaatata
caagatgcccatgaagctataagacctacatatgttgaaataacaccagagattgctaag
acaaacttaagtaatgatcaatataagttatatgctttaatatggaaaagattcatagca
agccaaatggctacatgtatattaaatactaatagtttagagattaaaaatggtgattat
acattaagagctagtggatctaccataaaatttgatggtttcatgaaagtttatgagtat
atatcaggagaagaggaagaatcagtacttttacctgaattagaagaaaatgaagtttta
aaagaagaatcaattgaaggtaaacaacattttactcaaccacctgctagatattcagag
gctgcttttgttaagcttttagaggaaaaaggtattggaagaccaagtacttacgttcca
acaatatctacattaataagtagaaaatatgtagatagagagaaaaagattcttatacca
acagaattaggatttatagtaaatgatatactttcaaattattttaagcagatagttgat
actgactttactgcagaaatggaagttaagcttgataatgttgaagctggaaaagaaagt
tggactcatatagtagatgaattctttactccattaaaagaagatatagaaaaggcagaa
aaagagatatctaaggttattatagaagataaagtcagttatgtaccttgtgataaatgt
ggaagacttatggttattaagcatggaagatttggagatttcttagcttgccctggatat
ccagagtgtcaaaacacaaaacctatagttgaagaggttgatgcaaactgtccattatgt
ggaggaaagattttagttaagagaagtaaaaagggaaacagattctatggatgtagtaat
tatccagagtgtaatttcgtaagttggtatgagccaacaaatgaaaaatgtccagaatgt
agttcatatatggttaagagatactctaagagtaaaggtgaatatttacagtgtagcgat
aaagaatgtaaatatgaaaaaataattgaaaaaaataatgatgaaaataactcagaaaag
tag
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