Clostridium perfringens SM101: CPR_1789
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Entry
CPR_1789 CDS
T00379
Symbol
xseB
Name
(GenBank) exodeoxyribonuclease VII, small subunit
KO
K03602
exodeoxyribonuclease VII small subunit [EC:
3.1.11.6
]
Organism
cpr
Clostridium perfringens SM101
Pathway
cpr03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cpr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
CPR_1789 (xseB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cpr03400
]
CPR_1789 (xseB)
Enzymes [BR:
cpr01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
CPR_1789 (xseB)
DNA repair and recombination proteins [BR:
cpr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
CPR_1789 (xseB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_S
TelA
NET2A
MCPsignal
TTC3
DUF4600
PigL_N
SHCBP_N
FliD_N
FlgK_D1
BRE1
Glyco_hydro_67C
DUF2951
Motif
Other DBs
NCBI-ProteinID:
ABG85578
UniProt:
Q0SS03
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All DBs
Position
complement(1988796..1989023)
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AA seq
75 aa
AA seq
DB search
MARKETNYESMVSELNEIVKQLENGDLTLEESIKSYENGVKIVNKLYKKLSTLEGKIKVV
EDEKEEDFGGYSNEY
NT seq
228 nt
NT seq
+upstream
nt +downstream
nt
atggctagaaaagaaactaattatgaaagtatggttagtgaattaaatgaaatcgtaaag
caacttgaaaatggagatttaaccttagaagagtctataaaaagctatgaaaatggcgtt
aaaatagtaaataaactatataagaagctaagcactttagaaggaaaaataaaggttgtt
gaagatgaaaaagaggaagactttggaggatacagcaatgaatattaa
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