Clostridium perfringens SM101: CPR_1938
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Entry
CPR_1938 CDS
T00379
Symbol
potD
Name
(GenBank) spermidine/putrescine ABC transporter, spermidine/putrescine-binding protein
KO
K11069
spermidine/putrescine transport system substrate-binding protein
Organism
cpr
Clostridium perfringens SM101
Pathway
cpr02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
cpr00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
CPR_1938 (potD)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cpr02000
]
CPR_1938 (potD)
Transporters [BR:
cpr02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Spermidine/putrescine transporter
CPR_1938 (potD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_8
SBP_bac_6
SBP_bac_1
SBP_bac_11
ABC2_membrane_3
Nakanori
Motif
Other DBs
NCBI-ProteinID:
ABG87581
UniProt:
Q0SRK9
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All DBs
Position
2142980..2144062
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AA seq
360 aa
AA seq
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MKLKKFLALTCSTLLLSSLFLGCGPKKDEEATQDKNNNVLYVYNWGDYIDPELLTKFKEE
TGIDVKYDVYDTNEIMYQKLNSGNVSYDIVIPSDYMIEKMKEEDMLAKIDYSNIPNYKYI
GEQFKNLAYDPTNEYSVPYMWGTVGIIYNTKKVSDPVDSWNILWNPKYKDQVIMPDSVRD
AMAVAEKKLGYSLNTENLDQIEAAKKELMTQKKDGLILAYMVDQVKDAMVGGEASLAVAW
SGDAVTMIERNPDLAYAIPKEGSNKWFDAIGIPKNAKHKENAEKFINFLCDSENAEQNVE
YIGYSTPNTAAYDLLPEDIRDNKVAYPDKESLKNCEVFIDLPSKILRKYDEAWLEIKCIY
NT seq
1083 nt
NT seq
+upstream
nt +downstream
nt
atgaaattaaaaaaatttttagcattaacttgttcaacacttcttttatcatctcttttt
cttggttgtggaccaaaaaaggatgaggaagctactcaagataaaaacaataacgttctt
tatgtttataactggggagattacatagatccagaactacttactaaatttaaagaagaa
actggaatagatgttaagtacgatgtttatgatactaatgaaataatgtatcaaaaactt
aatagtggtaatgtatcttatgatatagtaattccttctgattacatgatagaaaaaatg
aaagaagaagatatgttagctaagatagattattctaatattcctaattataaatatata
ggagaacaatttaaaaatttagcttatgatccaactaatgaatactcagtaccatatatg
tggggaacagttggaataatatataatacaaagaaagttagtgatcctgtagatagttgg
aatatcctttggaaccctaaatataaggatcaggttataatgccagatagcgttagagat
gctatggctgttgcagaaaaaaaattaggatattcattaaatactgaaaacttagatcaa
atagaagctgctaaaaaggaacttatgactcaaaaaaaagatggattaatcttagcttat
atggttgaccaagttaaagatgccatggttggtggagaagcttcccttgctgttgcttgg
tctggagatgctgtaacaatgatagagagaaatcctgatttagcttatgctattcctaag
gaaggatcaaataaatggtttgatgctataggaattcctaaaaatgcaaagcataaagaa
aatgctgagaagtttataaacttcctttgcgattctgaaaatgctgagcaaaatgtagaa
tatataggatactctactccaaacacagccgcatatgaccttttacctgaggatataaga
gataataaagttgcatatccagataaagagtcattaaaaaattgtgaggtatttatagat
ttaccttctaaaatacttagaaaatatgatgaagcttggttagaaatcaagtgtatttat
taa
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