Clostridium perfringens SM101: CPR_1962
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Entry
CPR_1962 CDS
T00379
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
cpr
Clostridium perfringens SM101
Pathway
cpr03030
DNA replication
cpr03410
Base excision repair
cpr03420
Nucleotide excision repair
cpr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cpr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CPR_1962 (polA)
03410 Base excision repair
CPR_1962 (polA)
03420 Nucleotide excision repair
CPR_1962 (polA)
03440 Homologous recombination
CPR_1962 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cpr03032
]
CPR_1962 (polA)
03400 DNA repair and recombination proteins [BR:
cpr03400
]
CPR_1962 (polA)
Enzymes [BR:
cpr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CPR_1962 (polA)
DNA replication proteins [BR:
cpr03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
CPR_1962 (polA)
DNA repair and recombination proteins [BR:
cpr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
CPR_1962 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CPR_1962 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_polI_exo1
DNA_pol_A_exo1
XPG_I
HHH_2
HHH_5
PriX
UvsW-1
DUF4960
Motif
Other DBs
NCBI-ProteinID:
ABG86698
UniProt:
Q0SRI6
LinkDB
All DBs
Position
complement(2166242..2168842)
Genome browser
AA seq
866 aa
AA seq
DB search
MKRLLILDGNSLLNRAFYAVPLLSNSEGTHTNAIYGFTNMLFKMREDIKPDYIVCTFDKK
APTFRHLEYGDYKAGRKKMPPELAEQFPIVKEMLKLFSITTYELDGFEADDIIGSLAKVA
EGEGIEVYIITGDKDALQLAAKDINVCITKKGVSEIEVYNYDRMVEEYGVTPTQFIDVKG
LMGDKSDNIPGVPGVGEKTAFKLIKEYGSVEAVLENIDNISGKKLKENLTEYSEQAIFSK
KLATIMTNVPIDFDLDEIKSKDDYNKDQLKALFTKLQMKSILDKLSNGEEEEPEIEVKIT
NIENNKKLEDLFNNINEEVYINFTYLNKEKYSTIEIDKIFINYDEKNYLINFKELAQEEE
NIKALKEFFENEDILKNGYSIKNALTALKKLGIEFKGLAFDCELAAYLIDSSKGEYTLLS
LINNYLSKFPNVKDGEEDLVGISFMKELTLVLKKKIEEEKMERLMYDIELPLETVLSSME
SIGFKVNKDILDELSIKFKRELEETQKEIFELADEEFNINSPKQLGKILFEKLDLPVIKK
TKTGYSTNAEVLEKLKDKHPIIEKITYFRQLSKIYSTYVEGLKSVIDTDGSIHSTFNQTV
TTTGRLSSTEPNLQNIPIKYEMGREIRKVFIPKEEGDLLISADYSQIELRVLAHISGDEN
MIDAFNHHSDIHTKTASEVFKVPVEEVTPLMRSRAKAVNFGIVYGIGDFSLSQDLNISRK
EAKEYMDIYFERYPKIKEYISKVIHEAQTKGYVLTMLNRRRYIPEANASNKIVKALGERL
AMNAPIQGTAADIIKLAMVNVYNKLKELNLNSKLILQVHDELIINVVKGELDIVKKLLKE
EMENTIKLSVPLDVDVNVGEDWYKLK
NT seq
2601 nt
NT seq
+upstream
nt +downstream
nt
atgaaaagattattgatattagacgggaacagtcttttaaatagagccttttatgctgtg
cctttgcttagcaatagtgaaggaactcatacaaatgctatttatggttttacaaatatg
ctttttaagatgagagaggatataaaacctgattatatagtttgtacttttgataaaaaa
gcaccaacttttagacatttagagtatggggattataaggctggaagaaagaaaatgcct
cctgagttagcagagcagtttcctattgttaaggaaatgctaaagttattttcaataaca
acttacgaattagatggattcgaagcagatgatattataggaagtttagctaaggtggct
gaaggtgaaggaatcgaagtttatattattactggagataaggatgctcttcaactagca
gctaaggatataaacgtatgtataactaagaagggtgtttctgaaatagaagtttataac
tatgatagaatggttgaagaatatggagttactcctactcagttcatagatgttaaagga
cttatgggagataaatctgataatattccaggggtaccaggagtaggagaaaaaacagcc
tttaaattaataaaagagtatggttcagtagaggcagttttagaaaatatagataacata
agtggtaaaaagttaaaagaaaatttaactgagtacagcgaacaggctatattctctaaa
aagttagctactattatgactaatgttcctatagattttgatttagatgagattaaatca
aaggatgattataataaagatcagttaaaagctttatttacaaagcttcaaatgaaatct
atattagataaattatcaaatggggaagaagaagagccagaaatagaagttaaaataact
aatatagaaaataataaaaaattagaagatttatttaataatataaacgaagaagtatat
attaattttacttatttaaataaagaaaagtattctactatagagattgataaaatattt
attaattatgatgagaaaaattatttaattaactttaaagagttagcacaagaagaggag
aatattaaagcccttaaagaattttttgagaatgaagatatattaaaaaatggctatagt
ataaaaaatgccttaacagcattaaaaaaattagggatagaatttaagggattagccttt
gattgtgaattagcagcatatttaatagattcatctaagggagaatatactcttttatcc
ttaataaataactatctttcaaaattccctaatgtaaaagatggagaggaagacttagtt
ggaatttcatttatgaaagagttgactttagttctaaagaaaaagatagaagaagagaaa
atggaaagacttatgtatgatattgagcttcctttagaaacagttttatcttctatggaa
tcaataggatttaaagtaaataaagatattttagatgagttatctattaagtttaaaaga
gagttagaggaaacacaaaaagagatctttgaacttgcagatgaagagtttaatataaat
tctccaaaacaattaggtaagatattatttgaaaaattagatttaccagttataaagaaa
actaaaactggatattcaactaacgcagaagtattagaaaagcttaaggacaaacatcct
ataatagaaaaaataacatattttagacagctttcaaaaatatattcaacttatgttgaa
ggattaaagtctgttatagatacagatggttctatacattcaacatttaatcaaactgta
actactacaggtagactttcatcaacagagcctaatcttcaaaatatacctataaaatat
gaaatgggtagagaaataagaaaggtatttataccaaaagaagaaggagatttattaata
tcagctgactactcacaaatagaacttagagttttagctcatatttctggtgatgaaaat
atgatagatgcatttaatcatcattcagatatacacactaagactgcttctgaagtgttt
aaagtaccagttgaagaggtaactccattaatgagaagtagggctaaggcagtaaacttt
ggtatagtatatggaatcggagattttagtctttcacaggatttaaatatttcaagaaaa
gaagctaaagaatatatggatatatattttgaaagatatccaaaaattaaagagtatatt
tctaaggttattcatgaagctcaaacaaagggatatgtattaactatgttaaatagaaga
agatatatacctgaagcaaatgcttcaaataaaatagtaaaagccctaggagaaagactt
gcaatgaatgctccaatacaaggaacagcagcagatataataaagcttgctatggtaaat
gtatataacaagttaaaagaattaaatttaaatagtaagttaatattacaagttcatgat
gaacttataataaatgttgtcaaaggagaattagacattgttaagaaacttctaaaagag
gaaatggaaaatacaattaaattaagtgtaccattagatgttgatgttaatgttggagaa
gattggtataagttaaaataa
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