Clostridium perfringens SM101: CPR_2098
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Entry
CPR_2098 CDS
T00379
Name
(GenBank) ribonuclease, Rne/Rng family
KO
K08301
ribonuclease G [EC:3.1.26.-]
Organism
cpr
Clostridium perfringens SM101
Brite
KEGG Orthology (KO) [BR:
cpr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cpr03019
]
CPR_2098
03009 Ribosome biogenesis [BR:
cpr03009
]
CPR_2098
Messenger RNA biogenesis [BR:
cpr03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
CPR_2098
Ribosome biogenesis [BR:
cpr03009
]
Prokaryotic type
rRNA processing factors
CPR_2098
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_E_G
Motif
Other DBs
NCBI-ProteinID:
ABG86962
UniProt:
Q0SR50
LinkDB
All DBs
Position
complement(2323738..2325180)
Genome browser
AA seq
480 aa
AA seq
DB search
MRDIYVERRENLLRVAIKENNLLSECYIEEESLEPVQGEIYKGIVKRVVPGIKSAFIDIG
YSKQAYMILGEDEKDLKQGDGIIVEVLKEQFGSKGAKVTSKISLAGRYCVLETSRNDISI
SRKIENLEFKKELENSLIKPSELGVTVRTKAQSASIFEIQEEIEELYKNYKEVIREGKFS
LNPKKIMGKGDLINKIIRDDIDAYTSSIIVDSIEDYERIKDSISNSEYLKVTLYDDARSL
FDYYGIEKEILSLRNNRVNLNCGGDIVIEKTEAMYVIDVNSGKNTNHKNKEKTAYETNKN
AAIEIARQIKIRNLGGIILVDFIDMYSQENKKKILKILKDEFKSDSQRAKIFPFTELGLV
QITRYRKGKSIYEYIEENCLACNGHGKRLKLSYINLLLRNEILKKNGEGKIKDFHIEINS
IYEKDIRGNIFEFLKEIGALDLNIYLNFQESKDFYKVEPLIFKNQIESVKEYLVKNIEKY
NT seq
1443 nt
NT seq
+upstream
nt +downstream
nt
atgagagatatatacgtagaaagaagagaaaatttattaagggttgccataaaggaaaat
aatcttttaagtgagtgctatatagaagaagagagtctagaacctgttcaaggagagata
tataaaggtatagttaaaagagtagttccaggaataaagagtgcctttatagatattggg
tatagtaaacaggcctatatgatacttggagaggatgaaaaagatctaaaacaaggagat
ggaataattgttgaagtattaaaagagcaatttggaagtaaaggggcaaaagttacttca
aaaatatctttagcaggaagatattgcgtcttagaaacttcaagaaatgatatttcaatt
tcaagaaagatagaaaatctagagtttaaaaaagaacttgaaaattcattgataaaacca
agtgaattaggggttactgttaggacaaaagcccaatcagctagtatttttgagattcaa
gaagaaatagaagaactatataaaaactataaagaggttattagagaaggtaaattttcc
ttaaatccaaaaaaaataatgggtaaaggagaccttattaataagataattagagatgac
attgatgcttatacttcttcaataattgttgattctatagaagattatgaaagaataaaa
gatagtatttctaattctgaatatttaaaagtaactctttatgatgatgctagaagcctt
tttgattattatggtatcgaaaaagaaattcttagccttagaaataatagagtgaattta
aattgtggcggagacatagttatagaaaaaacagaggctatgtatgttatagatgttaat
tcaggtaagaatacaaatcataaaaataaagaaaaaactgcctatgaaactaataaaaat
gcggcaatagaaattgctagacaaattaaaattagaaatttaggtggaataatattagtt
gattttatagatatgtattcacaggaaaacaagaaaaaaatattaaaaatattaaaagat
gaatttaaaagtgatagccaaagagctaaaatttttccttttacagagcttggattagta
caaataacaagatatagaaaaggaaaaagcatttatgaatatatagaagaaaattgctta
gcatgtaatggtcatggaaagagattaaagttatcttatataaatcttcttttaagaaat
gagattttgaagaaaaatggagaaggaaagataaaagatttccatatagaaataaactct
atttatgaaaaagatattagaggaaatatttttgagtttttaaaagaaattggagcatta
gatttaaatatttacttgaattttcaagaatctaaagacttttataaagtagaaccattg
atctttaaaaatcaaatagaaagcgtaaaagagtatttggtgaagaatatcgaaaaatat
taa
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