Clostridium perfringens SM101: CPR_2246
Help
Entry
CPR_2246 CDS
T00379
Symbol
pcrA
Name
(GenBank) ATP-dependent DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
cpr
Clostridium perfringens SM101
Pathway
cpr03420
Nucleotide excision repair
cpr03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cpr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CPR_2246 (pcrA)
03430 Mismatch repair
CPR_2246 (pcrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cpr03400
]
CPR_2246 (pcrA)
Enzymes [BR:
cpr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CPR_2246 (pcrA)
DNA repair and recombination proteins [BR:
cpr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CPR_2246 (pcrA)
MMR (mismatch excision repair)
Other MMR factors
CPR_2246 (pcrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
Viral_helicase1
AAA_11
DEAD
Motif
Other DBs
NCBI-ProteinID:
ABG87199
UniProt:
Q0SQT5
LinkDB
All DBs
Position
complement(2461165..2463420)
Genome browser
AA seq
751 aa
AA seq
DB search
MDLKSLLNKEQYEAATTIDGQVLILAGAGSGKTRVLTHRIAYMIENDIKPYNILAITFTN
KAAGEMRERVKSLVGEVANNMWISTFHSSCVRILRREIDKLGYSKDFTIYDSSDQKTLIK
LVMKELNINEKEITDLEILGTIGKAKDNIQSAQSFKKENESNFRKNKIADAYLLYQKKLK
ENNALDFDDLIVKTVELFRKHNDVLEFYQNKFKYIMIDEYQDTNKAQYEFAKLLAAKHKN
ICVVGDDDQCIYAWRGADIRNILDFEKDYPEAKVVKLEQNYRSKGNILEAANKVIKNNAE
RKFKILRTEQVEGEKISIHRAYSDKMEAAFVVSEIEKLKSDKGYKYKDFAVLYRTNAQSR
NFEEALRRAGIPYRIFGGLKFYDRKEIKDVLAYLKIIVNPKDSISLRRIINVPKRSIGDT
TVEKLQNHASEIDDTLYNVLLDVDYVPGLTARSINPIKKFTDMMEEIMVMSEQLSVSQLI
EYVLEKTGYLKSLKDSKLIEDQSRIENLEELVSDAVEFEKSNEEDKSLSAYLEKVALVQD
MDDLEAEDNYVMLMTVHSSKGLEFPTVFLVGMENGIFPNAACFEHDNQMEEARRLCYVGI
TRAEEKLYMTSAETRMIFGKTVAYGQSDFISEIPANIKDYVNINGKSSSNSFKNSSQTYG
ETRKTYNPHSIRGGMSLSKANESLNKTLSGKSSGNAGIDELTMGRKVKHPKFGVGTLITK
SKVGDDYKLTIAFDSQGVKHLMFSFAPLELL
NT seq
2256 nt
NT seq
+upstream
nt +downstream
nt
atggatttaaaaagcttgcttaataaagaacaatatgaagcagcaaccacgattgatggt
caagtacttatattagcaggagcaggttctggtaaaactagagtacttacacacagaata
gcatacatgatagaaaatgatataaaaccttataatatattagcaataacatttacaaat
aaagcggcaggggaaatgagagagagagtaaaatctctagttggtgaagtggcaaacaac
atgtggatatcaacatttcattcatcttgcgtgagaattttaagaagagaaatagataaa
ttaggatatagtaaagactttacaatatatgattcatcagatcagaaaacattaataaaa
cttgtaatgaaagagcttaatattaatgaaaaagagataactgatttagagattttaggt
actataggaaaagcaaaggataatatccaaagtgcacaaagttttaagaaagaaaatgaa
agtaattttagaaaaaataaaatagcagatgcatatcttttataccaaaagaaattaaaa
gaaaataatgccctagattttgatgatttaatagtaaaaactgttgagttatttagaaag
cataatgatgtattagagttttatcaaaataagtttaaatacataatgatagatgagtat
caagatacaaataaagctcaatatgaatttgctaagcttttagctgcaaaacacaaaaat
atatgcgtagttggtgatgatgaccaatgtatttatgcttggagaggggcagatataaga
aatatattagattttgaaaaggattatccagaggctaaagttgttaagcttgagcaaaac
tatagatcaaaaggaaatattttagaggctgctaataaagttataaaaaataatgcagag
agaaaatttaaaattttaagaactgagcaagtagagggagaaaaaataagtattcataga
gcttactcagataaaatggaggcagcttttgttgtttcagagatagaaaaattaaaaagt
gataaaggatataagtataaggattttgctgttctttacagaacaaatgcacagtctcgt
aattttgaggaagccttaagaagagcaggaattccatatagaatttttggaggactaaaa
ttctatgatagaaaagagataaaagatgttcttgcatacttaaaaataatagtaaatcct
aaagattctataagtttaagaagaataattaatgttcctaaaagaagcattggagatact
actgtagaaaaacttcaaaatcatgcgtccgaaatagatgatacattatacaatgtttta
ttagatgtagactatgtgccaggattaacagctagaagcataaatcctattaagaagttt
actgatatgatggaagaaataatggttatgtcagagcaattaagtgtatctcaattaatt
gaatatgttttagaaaaaacaggttatttaaaatcacttaaagattcaaagcttatagag
gatcaaagtagaatagaaaacttagaagaattagtttctgatgctgttgaatttgaaaag
agtaatgaagaagataaatcattatcagcttacttagagaaggttgcccttgttcaagat
atggatgatttagaagcagaagataattatgtaatgctaatgacagttcacagctcaaag
ggactagaattcccaacagttttcttagttggtatggaaaatggaatattcccaaatgca
gcttgctttgaacatgataatcaaatggaagaggctagaagactttgctatgttggaata
actagagctgaggaaaaattatatatgacatcagccgaaacaagaatgatatttggtaaa
acagtggcttatggacaatcagattttatatcagaaattccagctaacataaaagactat
gtaaatatcaatggtaaaagttcaagtaattctttcaaaaatagttcacaaacttatgga
gagactagaaaaacttataatcctcacagtataagaggagggatgagtctttctaaagca
aatgaatccctaaataagactttatcaggaaaatcttcaggtaatgcaggaatagatgaa
ttgactatgggaagaaaagttaagcatcctaagtttggtgtaggaacattaataacaaag
agtaaagttggagatgactataagcttacaattgcctttgatagtcaaggagttaaacat
ttaatgtttagttttgcaccactagagcttctttaa
DBGET
integrated database retrieval system
