Clostridium perfringens SM101: CPR_2488
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Entry
CPR_2488 CDS
T00379
Symbol
hup
Name
(GenBank) DNA-binding protein HU
KO
K03530
DNA-binding protein HU-beta
Organism
cpr
Clostridium perfringens SM101
Brite
KEGG Orthology (KO) [BR:
cpr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cpr03032
]
CPR_2488 (hup)
03036 Chromosome and associated proteins [BR:
cpr03036
]
CPR_2488 (hup)
03400 DNA repair and recombination proteins [BR:
cpr03400
]
CPR_2488 (hup)
DNA replication proteins [BR:
cpr03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
CPR_2488 (hup)
Chromosome and associated proteins [BR:
cpr03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
CPR_2488 (hup)
DNA repair and recombination proteins [BR:
cpr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
CPR_2488 (hup)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_1
HU-DNA_bdg
HU-CCDC81_euk_2
Arm-DNA-bind_4
Arteri_nsp7a
tRNA_anti-like
Peptidase_C80
VWA_3
Motif
Other DBs
NCBI-ProteinID:
ABG86893
UniProt:
Q0SQ72
LinkDB
All DBs
Position
complement(2701170..2701445)
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AA seq
91 aa
AA seq
DB search
MNKAELITSMAEKSNLTKKDAELALKAFIESVSETLENGDKVQLVGFGTFETRVRAEREG
RNPRTKEVIKIPASIAPVFKPGKELKERVNA
NT seq
276 nt
NT seq
+upstream
nt +downstream
nt
gtgaataaagcagaattaataacaagcatggctgaaaaaagcaacttaactaaaaaagat
gctgaattagctttaaaagcattcatagaaagcgttagcgaaactttagaaaatggtgac
aaagttcaattagttggatttggaactttcgaaactagagtgagagctgaaagagaagga
agaaacccaagaactaaagaagttataaaaatacctgcttcaatagctcctgtattcaag
ccaggtaaagagttaaaagaaagagttaacgcttaa
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