Collimonas pratensis: CPter91_0084
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Entry
CPter91_0084 CDS
T04306
Symbol
aefR
Name
(GenBank) transcriptional regulator AefR
KO
K19736
TetR/AcrR family transcriptional regulator, regulator of autoinduction and epiphytic fitness
Organism
cpra
Collimonas pratensis
Brite
KEGG Orthology (KO) [BR:
cpra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cpra03000
]
CPter91_0084 (aefR)
Transcription factors [BR:
cpra03000
]
Prokaryotic type
Helix-turn-helix
TetR/AcrR family
CPter91_0084 (aefR)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TetR_C_7
TetR_N
TetR_C_11
TetR_C_6
Nmad5
HTH_22
HTH_11
TetR_C_24
Motif
Other DBs
NCBI-ProteinID:
AMP02483
UniProt:
A0A127PXE5
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All DBs
Position
complement(81490..82110)
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AA seq
206 aa
AA seq
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MSTVPRLTDRKREAIVQAAIAEFRSNGFETTSMDKIAARAEVSKRTVYNHFPGKEELFAE
ILTRLWQTSEEQSALSYRPAKPLRGQLRELLQSKMRMLNDSNFLDLARVAIAAAIHSPER
TQDMLARMGQREEGVNTWIVAAQADGRLKAVDPAFAAHQLQSLLKTFAFWPQITLGQPPL
SAEMQQEVVDSAVDMFLAYYQLRAER
NT seq
621 nt
NT seq
+upstream
nt +downstream
nt
atgagcactgttccgcgtctcaccgaccgcaagcgcgaagccatcgtccaggcggctatc
gccgaattccgcagcaacggcttcgaaaccaccagcatggacaagatcgctgcccgcgcc
gaagtctccaagcgcacggtctacaaccatttccccggcaaggaagaactgtttgcggaa
atcctgacccggctgtggcagaccagcgaggagcaaagcgctctcagctatcgccccgcc
aaacccctgcgcgggcagctgcgcgaactgctgcaatcgaagatgcgcatgctcaacgac
agcaacttcctcgacctggcgcgggtcgccattgcggccgccatccattcgccggaacgg
acccaggacatgttggcgaggatgggccagcgggaagaaggcgtcaacacctggatcgtc
gcggcgcaggctgacggccggctgaaagccgtcgatccggcattcgccgcgcatcagctg
cagagcctgctgaaaacttttgcgttctggccgcagattaccttgggccagccgccgctg
agcgccgagatgcagcaagaggtggtggattcggcagtagacatgttcctggcctactac
cagctgcgggccgaacgctga
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