Collimonas pratensis: CPter91_0088
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Entry
CPter91_0088 CDS
T04306
Name
(GenBank) bacterial DNA-binding family protein
KO
K03530
DNA-binding protein HU-beta
Organism
cpra
Collimonas pratensis
Brite
KEGG Orthology (KO) [BR:
cpra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cpra03032
]
CPter91_0088
03036 Chromosome and associated proteins [BR:
cpra03036
]
CPter91_0088
03400 DNA repair and recombination proteins [BR:
cpra03400
]
CPter91_0088
DNA replication proteins [BR:
cpra03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
CPter91_0088
Chromosome and associated proteins [BR:
cpra03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
CPter91_0088
DNA repair and recombination proteins [BR:
cpra03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
CPter91_0088
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-DNA_bdg
HU-CCDC81_euk_2
UBA_HYPK
Myb_DNA-bind_8
Motif
Other DBs
NCBI-ProteinID:
AMP02487
UniProt:
A0A127PXG8
LinkDB
All DBs
Position
83713..83997
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AA seq
94 aa
AA seq
DB search
MNKTELIDAIATDCEISKAAAQRALESVVDNVIKAVTKGSTVQLIGFGSFSSGKRAARVG
RNPRTGEAIKIAAAKTVKFTAGKAFKDAVNKKKK
NT seq
285 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaaaccgaattgatcgacgccattgctaccgactgcgaaatctcgaaggccgct
gcacagcgcgcactggagtccgtcgtggacaatgtgatcaaggctgttaccaaaggcagt
actgttcaattgattggatttggttcgttctcttccggtaagcgcgccgctcgtgtcggc
cgcaacccacgtaccggcgaagcaatcaagatcgctgctgccaagactgtgaaattcaca
gctggtaaagcattcaaagatgctgtgaacaagaagaagaaataa
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