Collimonas pratensis: CPter91_0840
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Entry
CPter91_0840 CDS
T04306
Name
(GenBank) uvrD/REP helicase N-terminal domain protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
cpra
Collimonas pratensis
Pathway
cpra03420
Nucleotide excision repair
cpra03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cpra00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CPter91_0840
03430 Mismatch repair
CPter91_0840
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cpra03400
]
CPter91_0840
Enzymes [BR:
cpra01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CPter91_0840
DNA repair and recombination proteins [BR:
cpra03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CPter91_0840
MMR (mismatch excision repair)
Other MMR factors
CPter91_0840
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_12
PcrA_UvrD_tudor
Viral_helicase1
AAA_30
Motif
Other DBs
NCBI-ProteinID:
AMP03228
LinkDB
All DBs
Position
862790..865069
Genome browser
AA seq
759 aa
AA seq
DB search
MQNLLHNLNPEQLAAVTLPAQSALILAGAGSGKTRVLTTRIAWLIQTGQVSPSGVLAVTF
TNKASKEMMTRLSAMLPINTRGMWIGTFHGLCNRLLRAHYRDAALPQTFQILDSQDQLSA
IKRLLKAMNVDDEKYPPRNLMYFINGAKDQGLRANEVEANDDYNRKFVELYDLYDQQCQR
EGVVDFAELLLRTYELLSRNQPLREHYQSRFQHILVDEFQDTNDLQYKWLKLMAGQRGAV
FAVGDDDQSIYAFRGANVGNMTAFEHEFRVENLIKLEQNYRSHGHILDSANTLIANNSKR
LGKNLRTDAGHGEPVRIYEATSDLQEAQWIVEETKSLINDGGSRSEIAVLYRSNAQSRVI
EHALVASGIPYRVYGGQRYFERAEVKHAIAYLQLMDNPHNDSAFLRVVNFPARGIGARSL
EQLQDAAKQYGISLYAAVPYVAGKAGATLGSFLKLIEGGRFETQHLPLPEMVQVVLDLSG
LLQHYQNEKEGADRIENLEQLVNAATLFVSEEGFGIDAPALLGPKAQAVSGAAITTADGI
EVFDADAPLSAVMSPLSAFLSHASLEAGNNQAQAGEEALQLMTVHSAKGLEFDAVFITGL
EEGLFPHENSQKEDAGVEEERRLMYVAITRAKKRLYMSFSQTRMLHGQTRYNMRSRFFDE
LPEDALKWLSPKVQQHSWFANTKSAWDEAPEKAANNISKNFGRRDIGWRIGENVAHLKFG
EGVIVNIEGSGGNARAHINFGKHGMKLLDLSVAKLEKVA
NT seq
2280 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaatcttctccataacctcaatccagaacaactggcggcagtcaccttgcctgcg
cagtccgcactcatcctggccggcgccggttccggcaagacgcgggtgctgaccacccgc
atcgcctggctgatccagaccggccaggtgtcgccctccggcgtgctggcggtgaccttc
accaacaaagcctcgaaggaaatgatgacgcgcttgtcggcgatgttgccgatcaatacg
cgcggcatgtggatagggactttccatggcctgtgcaaccgcttgctgcgcgcgcattat
cgcgacgctgccttgccgcagaccttccagatcctcgattcgcaagaccagttgtcggcc
atcaagcgcctgctgaaggcgatgaatgtcgacgatgagaaatatccgccgcgtaacctg
atgtacttcatcaacggcgccaaggaccagggtttgcgcgccaatgaagtcgaagccaat
gacgattacaaccgcaagttcgtcgagctgtacgacttgtacgaccagcaatgccagcgc
gaaggcgtggtcgattttgccgagctgctgctgcgcacctatgaactgctgagccgtaac
cagccgctgcgcgaacattaccagtcgcgcttccagcacatcctggtggacgagttccag
gataccaacgacttgcaatacaaatggctgaagctgatggccgggcagcgcggcgcggtg
tttgcggtgggcgacgacgaccagagcatctacgctttccgcggcgccaatgtcggcaac
atgactgccttcgaacatgaattccgggtcgagaacctgatcaagctggagcagaactac
cgctcgcacggccacatcctggatagcgccaacaccctgatcgccaacaacagcaagcgt
ctcggcaagaacctgcggaccgacgccggccatggtgagccggtgcgcatctacgaagcc
accagcgacctgcaggaagcgcagtggatcgtcgaagaaaccaagagcctgatcaacgac
ggcggcagccgcagtgaaatcgccgtgctgtaccgctcgaatgcgcagtcgcgcgtaatc
gaacatgctttggtggcgtccggcatcccctaccgggtgtacggcggccagcgctatttc
gaacgggccgaagtcaagcacgcgatcgcctacctgcagctgatggacaatccgcataac
gattccgccttcctgcgcgtggtgaatttcccggcgcgcggtatcggcgcgcgctcgctg
gaacagttgcaggacgccgccaagcaatacggcatttccctgtacgcggcggtaccgtat
gtggcaggcaaggccggcgccacgcttggttccttcctcaagctgatcgaaggcggacgc
tttgaaacccagcacctgccgctgccggaaatggtgcaggtggtgctcgacctgagcggc
ctgctgcagcattaccagaatgaaaaagaaggcgccgaccgcatcgagaatctggagcag
ctggtgaatgctgcaaccctgtttgtctcggaagaaggattcggcatcgatgcgccggcc
ttgctcggccccaaggcgcaagccgtgtcgggcgccgccatcacgactgccgacggcatc
gaggtattcgacgccgacgcgccgttgtcggcggtgatgtcacccttgtcggcatttctt
tcgcacgcgtcgctggaggccggcaacaaccaggcccaggctggcgaggaagccttgcag
ctgatgacggtgcactcggccaagggcctggagttcgatgcggtgttcatcaccggcctg
gaagagggtttgttcccgcacgaaaattcgcagaaggaagacgccggtgtcgaagaagag
cggcgcctgatgtatgtcgccatcacgcgcgccaagaagcgcctgtacatgagcttttcg
cagactcgcatgctgcatggccagacccgctacaacatgcgttcgcgcttcttcgacgag
ctgccggaagatgccttgaagtggttgtcgccgaaggtgcagcagcatagctggttcgcc
aataccaaatcagcctgggacgaagcgcccgagaaagccgccaacaatatctcgaagaac
ttcggccggcgcgatatcggctggcgcatcggtgagaatgtcgcccacctgaaatttggc
gaaggcgtgatcgtcaatatcgaaggcagcggcggcaatgcgcgcgcccacatcaatttc
ggcaagcatggcatgaagctgctggacctgagcgtggcgaagctggagaaggtggcctag
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