Collimonas pratensis: CPter91_1030
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Entry
CPter91_1030 CDS
T04306
Name
(GenBank) PD-(D/E)XK nuclease superfamily protein
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
cpra
Collimonas pratensis
Brite
KEGG Orthology (KO) [BR:
cpra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cpra03400
]
CPter91_1030
Enzymes [BR:
cpra01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CPter91_1030
DNA repair and recombination proteins [BR:
cpra03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
CPter91_1030
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDDEXK_1
Motif
Other DBs
NCBI-ProteinID:
AMP03415
UniProt:
A0A127Q0P0
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All DBs
Position
1063303..1066053
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AA seq
916 aa
AA seq
DB search
MSLKSIFIAPSANFWPATASAMLASCRAGDEGMRDFSHWRVILPTFAHAQLLKAALSAQL
GGTFLPPQFFTLSGLLMTMPPLPNVLPASERLMRLYAELRQHGWLKKLFTARRNTDLLPL
AQTLLALSDELTQAMLPSLHDGGDAEDSAAEQRWQQALEQLSPDARKLLSDETQLVWSIW
KSQLDADDAIAARFSQMLQLAESSAQPLIWISSVAPEPLEQTFLDTYACRQQVLTITLDW
RVHALLPVYALAWPEMVEAADAVEQMAPAADQALSTELALCAAQSVEDEAVQGAQMVIDW
LQAGKTSLAIVAQDRVVARRIRALLERAQIHVADETGWKLSTTRAASAISAWFDVITARG
ETTALLDLLKSPFVLKAAPSDLLHSGQDGQDEQDSIANKSALVMKIELLLRRANVLGEWR
AVTSALSAAPAEQKTVALLAQQAGLFSGRKNLRDWIATTAAALDALGMSAALSADSAGQQ
ILQLLQNIAPPGNDFSALFSFPEWRALVNLQLDDTSFISAINDRRVVMLPLNGARLRSFD
AVLMVGADADHLPSQPQETLFFANTVRRELGLATRESRQRQQLRDVAELLALNPLVVLSW
QAHKDGEPNPVSPWIQRLQLTLARTGAPALPELRAKIAVQALQPTPSRMPAPAAAQLTPA
RLTASAYNSFIACPYQFFVRRMLGLASLDELSDLPEKRDYGGWLHEILETYHESLRDQPL
PPQEREALLAAISKKLFDAVIGKNAAALGYYARWQKVIAPYVAWANQHEAEGWRFVFGEQ
AYEKLLPLADRDLTLHGRIDRIDENDAGERAVLDYKTNNLLALNKKLKDHEDHQLAFYGL
LSDRPVASAHYVALETTKDKVGDVSAPDYDQAQGALAAQIKINVEAIAGGVGLPANGVAA
VCQYCDVRGLCRKGAW
NT seq
2751 nt
NT seq
+upstream
nt +downstream
nt
atgtccttaaagtcaatattcatcgcgccttccgccaacttctggcccgctacagcgagc
gccatgctggcgagctgccgtgccggcgatgaaggcatgcgcgatttttcgcactggcgc
gtgatcctgccgacctttgcccatgcccagctgctgaaagccgcgctgagcgcgcagctg
ggcggaactttcctgccgccgcaattcttcacgctgtcgggcctgctgatgaccatgccg
cccttgccgaatgtattgccggcgagtgagcgcctgatgcggctgtatgcggaattgcgc
caacatggctggctgaagaaattgttcaccgcgcgccgcaataccgatctgctgccgctg
gcgcagaccttgttagcgctatcagatgaattgacgcaagctatgctgccgtccttgcat
gatggcggcgacgccgaagacagcgccgccgaacagcgctggcagcaggcgttggagcag
ttgtcgccggatgcgcgcaagctgctgtcggatgaaacccagctggtgtggtcgatctgg
aaaagtcagctggacgccgacgacgccatcgccgcgcgcttcagtcaaatgctgcaactg
gcggagagttctgcgcaaccgctgatctggatcagctcggtcgcaccggaaccgttggaa
caaacttttctcgatacctacgcgtgccggcagcaggtgctgaccattaccctcgactgg
cgcgtgcacgccttgttgccggtgtatgcgctggcgtggccggagatggtggaagccgcg
gacgctgtcgagcagatggcgcctgcggccgatcaagcactctccaccgaactggcattg
tgcgcagcgcagagcgttgaggatgaggcggtgcaaggcgcgcaaatggtgatcgactgg
ctgcaggccggcaagaccagcctcgcgatcgtagcccaggaccgagtcgtggcgcggcgc
atccgcgccttgctggagcgggcgcagatccatgtggcggacgaaaccggctggaaactc
tcgaccacccgcgccgcctccgccatttcggcatggttcgatgtcatcaccgcgcgcgga
gaaaccacggccttgctcgatttgctgaagtcaccgttcgtcttgaaggcggcgcccagc
gatctgctgcatagtggtcaggatggacaggacgaacaggacagcatcgccaacaaatcg
gcgctggtgatgaagatcgaattgctgctgcggcgcgccaacgtgctcggcgaatggcgc
gcggtgaccagcgcgctcagcgccgcgcccgcggagcagaagaccgtggccctgctggcg
cagcaggccggactgttcagcggccgcaagaacctgcgcgactggatcgccactaccgcc
gccgcgctggatgcgctgggcatgagcgcggcgctgagcgccgattcggccggccagcag
atcttgcagctgctgcagaatatcgccccgccggggaatgatttttctgccctgttttcg
tttcccgaatggcgtgcgctggtcaacctgcagctggacgataccagtttcatcagcgcc
atcaacgatcgccgggtcgtcatgctgccgctgaacggcgcacgcctgcgcagtttcgac
gccgtgctgatggtgggtgcggatgccgaccacctgccgtcgcagccgcaggaaacgctg
ttcttcgccaacaccgtgcggcgagaactgggcctggccacgcgcgagagccgccagcgc
cagcagctgcgtgacgtcgccgaattgctcgccttgaatcctctggtggtgctgtcctgg
caggcgcacaaggacggcgagccgaatccggtcagcccatggatccagcgcctgcaattg
actttggcgcgcactggcgcgccggccttaccggaactgcgggccaagatcgccgtgcag
gccctgcagccgacgccgtcgcgcatgccggcgccggctgctgcgcagctgacgccggca
cgcttgactgccagcgcttacaacagcttcatcgcctgtccatatcaattctttgtccgc
cgtatgctgggcctggcctcgctcgatgaattgtctgacctgccggaaaagcgcgattac
ggcggctggctgcatgaaatcctggagacctatcacgagtctctgcgggaccagccgttg
ccgccacaggagcgcgaagccttgctggcagcgatatcaaaaaaattgttcgatgccgtc
atcggcaagaatgcggctgcgctcggctattacgcacgctggcaaaaagtgatcgcgccg
tatgtggcatgggccaaccagcatgaagccgaaggatggcgctttgtgtttggcgagcag
gcgtatgaaaagctgctgccgctggcggaccgcgacctgacgctgcacgggcggattgac
cgtatcgatgaaaacgacgccggcgaacgcgccgtgctcgactacaagaccaacaacctg
ctggcgctgaacaagaagttgaaagaccacgaagaccatcagctggcgttctacggcttg
ctgtccgaccggccagtggcctcggcccattacgtcgcgctggaaaccaccaaggataag
gtcggcgatgtcagtgcgcccgactatgaccaggcgcaaggcgcgctggcggcgcagatc
aagatcaacgtggaggcgattgccggtggcgtcggtctgcctgccaacggcgtcgctgcg
gtctgccagtactgcgatgtacgcggcctgtgccgcaagggagcctggtga
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