Collimonas pratensis: CPter91_1140
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Entry
CPter91_1140 CDS
T04306
Symbol
dnaE
Name
(GenBank) DNA polymerase III, alpha subunit
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
cpra
Collimonas pratensis
Pathway
cpra03030
DNA replication
cpra03430
Mismatch repair
cpra03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cpra00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CPter91_1140 (dnaE)
03430 Mismatch repair
CPter91_1140 (dnaE)
03440 Homologous recombination
CPter91_1140 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cpra03032
]
CPter91_1140 (dnaE)
03400 DNA repair and recombination proteins [BR:
cpra03400
]
CPter91_1140 (dnaE)
Enzymes [BR:
cpra01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CPter91_1140 (dnaE)
DNA replication proteins [BR:
cpra03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CPter91_1140 (dnaE)
DNA repair and recombination proteins [BR:
cpra03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CPter91_1140 (dnaE)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DNA_pol_IIIA_C
Motif
Other DBs
NCBI-ProteinID:
AMP03524
UniProt:
A0A127Q0I9
LinkDB
All DBs
Position
1184456..1187929
Genome browser
AA seq
1157 aa
AA seq
DB search
MTTPQFIHLRLHSEYSIVDGLVRIDDVVKAAASDGQAALGISDLANLFGMVKFYKAARGK
GIKPIIGCDVWITNDDERDKPSRLLLLVKNRSGYLQLCELLSRAWLENLHRGRAEIRAEW
LEGLKDHGNGSGNGLIALSGAHFGDIGMAIDNGNSEAAERCIQRWMNIFPDNFYVEVQRA
EQPNMEAHVRQAVALAAKFGVPVVATHPTQFLDKEEFIAHEARTCIAEGEMLANARRVRR
FNVQQSFKSQAEMAELFADMPAALQNSIEIAKRCNLTLQLGKPQLPDFPTPDGMTIGEFL
IQQSQEGLELRLVHLFPDEAKREQQRQRYQDRLKFETDTIIKMGFPGYFLIVAEFIRWAK
QNGVPVGPGRGSGAGSLVAYSLQITDLDPLKYNLLFERFLNPERVSMPDFDIDFCQEGRD
RVIQHVKDLYGKDAVSQIATFGTMAAKGAIRDVGRVLDFGYNFCDGISKLIPFKPGKHVT
IADAIQEEPMLAERLENEEEVKQLLNLAQQVEGIARNIGMHAGGVLIAPGKLTDFCPLYT
QGGDAGVVSQYDKDDVEAVGLVKFDFLGLTTLTILDRAVRYIKQLDPAMADFSLEKLPLN
DRASYELLTAAKTVAVFQLESRGMQGMLKDARPDRFEDIIALVALYRPGPMDLIPDFCKR
KHGERFDYPDPRTEGILSETYGIMVYQEQVMQMAQVVGGYSLGGADLLRRAMGKKKAEEM
AEHRQIFRDGAAKDGLSEAKADEIFDLMEKFAGYGFNKSHAAAYALLSYHTAYLKAHHPA
AFMAANLSLAMDDTEKIKILVEDSLVICKLTLLPPDINLSDYRFTPEGEPGKKATFIRYG
LGAVKGSGQNAIEAIIAARQEKPFVDLFDFCLRVDKRQINRRTIESLIRAGAFDCFKVDR
GILLASVPRAMEAADQKLASANQVSLFGGDDSDLEAPIEYVQATPWTDKQKLTEEKSALG
FYLSGHLFHAYAAEARRFARTPLGSLEPSREPRTLAGIISSLRTQMTQRGKMMIVTLDDG
SATLDVTVYNEQFEPNKAFFKEDEFLVVQGKVSEDRFNGGLRVSAEKVMDIATARIHYGR
QLVLSLSSPEGIVDVGQLKGMLSEHRSDVGLPLTVRYANSEIACEIAFGEAWRVSPSDGL
RDVLVERLGQQAIAVEY
NT seq
3474 nt
NT seq
+upstream
nt +downstream
nt
atgacgacaccgcaatttattcatctccgcctccactctgagtattccatcgtcgatggc
ctggtgcgcatcgacgacgtagtgaaagcagcagccagcgacggccaggccgcgctcggc
atctccgacctggccaacctgttcggcatggtcaaattctacaaggctgcgcgcggcaag
ggcatcaagccgatcatcggctgcgatgtctggatcacgaatgacgatgaacgcgacaag
ccgtcgcgtttgctgttgctggtcaagaaccgtagcggctatctgcagctgtgtgaactg
ttgtcgcgcgcctggctggaaaacctgcaccgcggccgcgctgaaatccgtgccgaatgg
ctggaaggcctcaaggaccacggaaatggcagcggcaatggcctgattgccttgtcgggc
gcgcacttcggcgatatcggcatggccatcgataacggtaactcggaagcggccgagcgc
tgcatccagcgttggatgaatattttcccggacaatttttacgtcgaagtgcaacgcgcc
gagcagccgaacatggaagcgcatgtgcgtcaggcagtggcgctggcggcgaaattcggc
gtgcccgtggtggccacccatccgacccagttcctggacaaggaagaattcatcgcgcac
gaagcgcgcacctgtatcgccgaaggcgagatgctggcgaatgcgcgccgcgtgcgccgc
ttcaatgtccagcaatcgttcaagagccaggccgagatggcggaactgtttgccgacatg
ccggcggccttgcagaattcgattgaaatcgctaagcgctgcaacttgacgctgcagctg
ggcaagccgcaactgccggattttccgacgccggatggcatgaccatcggcgaattcctg
atacagcaatcgcaggaaggcctggagctgcgcctggtgcacctgttcccggacgaagcc
aagcgcgagcagcagcgtcaacgctaccaggaccgcctcaagtttgaaaccgacaccatc
atcaagatgggtttccccggctacttcctgatcgttgccgagtttatccgctgggccaag
cagaacggcgtgccggtcggaccgggacggggctccggcgccggttcgctggtcgcctat
tcgctgcagatcaccgacctcgatccactcaaatacaatctgctgttcgagcgcttcctc
aatcctgagcgcgtctcgatgcccgacttcgatatcgacttttgccaggaagggcgcgac
cgcgtcatccagcacgtcaaggatttgtacggcaaggatgcggtatcgcagatcgccact
ttcggcaccatggcggccaaaggcgcgatccgcgacgtcggccgcgtgctcgacttcggc
tacaacttctgcgacggcatttccaagctgatccctttcaagccgggcaagcatgtgacg
attgccgatgcgatccaggaagagccgatgctggccgaacgcctggagaacgaggaagag
gtcaagcagctgctcaacctggcgcagcaggtcgaaggcattgcccgcaacatcggcatg
cacgccggcggtgtcctgatcgccccgggcaagctgacagatttctgtccgctttacacc
cagggcggcgatgccggcgtggtctcgcagtacgacaaggacgacgtcgaagcggtcggc
ctggtgaagttcgacttcttgggtttgactaccctcacgatcctcgaccgggcggtgcgc
tacatcaagcagctcgatcccgccatggccgatttcagcctggaaaagctgccgctcaac
gaccgtgcgtcctatgagctgctgaccgccgccaaaacggtcgccgtgttccagctggaa
agccgcggcatgcaaggcatgctgaaagatgcgcggcccgaccgcttcgaagacattatc
gcgctggtggccttgtaccgtccgggtccgatggacctgattcctgatttctgcaagcgc
aagcatggcgagcgcttcgattatccggatccgcgcaccgagggcatcctgtccgaaacc
tacggcatcatggtgtatcaggagcaggtgatgcagatggcgcaggtggtcggcggctac
tcgctcggcggcgccgatttgctgcggcgggcgatgggtaagaaaaaggcagaagaaatg
gcggagcaccgccagattttccgcgacggcgcggccaaggacggcttgagcgaagccaag
gccgacgagattttcgacttgatggaaaaattcgcgggctacggcttcaacaagtcgcac
gctgccgcctatgcgctgctgtcgtatcacaccgcctacctgaaagcacaccatcccgcc
gcgttcatggccgccaacttgtcgctggcgatggacgacacggaaaagatcaagatcctg
gtggaagattcgctggtcatctgcaagctgaccttgctaccgcccgacatcaatctgtcg
gactaccgtttcacgccggaaggcgagccgggtaagaaagcgactttcattcgttacggc
ctcggcgccgtcaaaggttcgggacagaatgcgatcgaagccatcatcgccgcccgccag
gaaaaaccattcgtcgacctcttcgatttctgcctgcgcgtggacaagcgccagatcaac
cgccgcaccattgagtcgctgatacgtgccggcgccttcgactgcttcaaggtcgaccgc
gggatcctgttggcctcggtgccacgtgcgatggaagccgccgatcagaaactggcgtca
gccaatcaagtgagcctgttcggcggcgacgacagcgacctggaagcacctatcgaatat
gtgcaggcgacgccatggaccgacaagcagaaactgacggaagagaagagcgcgcttggc
ttctatctgtcaggacatttgttccatgcctacgccgccgaagcgcgccgttttgcacgc
acgccgctgggcagcctggaaccatcgcgcgagccgcgcaccctggccggcatcatctcc
agcctgcgcactcagatgacccagcgcgggaaaatgatgatcgtcaccttggatgacggc
agcgccacgcttgacgtcactgtctataacgaacagttcgaaccgaacaaggcgtttttc
aaggaagacgaatttctggtagtgcagggcaaggtgtcggaagaccgtttcaatggcggc
ttgcgggtatcggcagaaaaggtgatggatattgctactgcgcggattcattatgggcgc
cagcttgtcctctcgttgtcgtcgcctgaaggaatagtagatgttgggcagctgaaaggg
atgttgtctgagcatcgcagtgatgtcggtttgcctttgacggtccgttatgccaattct
gagattgcctgtgaaatagcgtttggagaggcatggcgggtttccccgagtgatggtttg
cgggatgtgctggtcgagcgtctgggacaacaggcaattgccgtggaatactaa
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