Collimonas pratensis: CPter91_1338
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Entry
CPter91_1338 CDS
T04306
Symbol
xylF
Name
(GenBank) D-xylose ABC transporter, D-xylose-binding protein
KO
K10543
D-xylose transport system substrate-binding protein
Organism
cpra
Collimonas pratensis
Pathway
cpra02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
cpra00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
CPter91_1338 (xylF)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cpra02000
]
CPter91_1338 (xylF)
Transporters [BR:
cpra02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
D-Xylose transporter
CPter91_1338 (xylF)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_4
Peripla_BP_1
Adhesin_P1_N
Peripla_BP_3
Motif
Other DBs
NCBI-ProteinID:
AMP03719
UniProt:
A0A127Q102
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All DBs
Position
1380973..1381989
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AA seq
338 aa
AA seq
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MNKILKKSLLTMMSVAVFSLTSSAAMADAKNPKIGFSIDDLRVERWARDRDFFIAAADKL
GAKVFVQSADASEQRQISQIENLISRGVDVIVIVPFNATVLSNTIKEAKKAGIKVVSYDR
LILNADIDAYISFDNEKVGEMQAEGVLKAQPKGNYYLLGGSPTDNNAKMLREGQMKVLQP
SIDKGDIKIVGQQWVKDWSATEALSIVENALTANNNKIDAIVASNDGTAGGAIQALASQK
MAGKVPVSGQDADLAAVKRVIAGTQSMTVYKPLKLIASEAAKLSVQLARNEKPSYNSQYE
NGAKKVDTILLKPTTLTKANVDLLVTDGFYTQAQISSK
NT seq
1017 nt
NT seq
+upstream
nt +downstream
nt
atgaacaagatcctgaaaaaaagcctgttgacgatgatgtccgtggcagtattttcgctc
accagttcggccgcgatggccgatgccaagaacccgaagatcggcttttccatcgatgac
ctgcgggtggagcgctgggcgcgtgaccgcgatttcttcatcgctgccgccgacaagctg
ggcgccaaggtgttcgtgcagtcggctgatgctagcgaacagcgccagatttcccagatc
gaaaacctgatttcgcgcggcgtcgacgtcatcgtgatcgtgccgttcaacgccaccgta
ctcagcaacaccatcaaggaagccaagaaggccggcatcaaggtggtgtcctatgaccgc
ctgatcctgaacgccgacatcgacgcctacatttccttcgacaatgaaaaagtcggcgag
atgcaagccgaaggcgtgctcaaggcgcaacctaagggcaattactatctgctgggcgga
tcgcccaccgacaacaacgccaagatgctgcgtgaagggcagatgaaggtgctgcagcca
tccatcgacaagggcgacatcaagatcgtcggccagcaatgggtcaaggactggagcgcc
acggaagcgctgtctatcgtggaaaacgcgctgaccgccaacaataacaagatcgacgcc
atcgttgcttccaacgacggcacggccggtggcgcaatccaggcgctggcttcgcagaaa
atggccggcaaggtgccggtctcgggacaggatgccgatctggctgcggtcaagcgcgtg
atcgctggcacccagtccatgacggtgtacaagccgctcaagctgatcgcctcggaagcc
gccaagctgtcggtgcagctggcacgcaatgaaaaaccgtcctataactcccagtatgaa
aacggcgccaagaaggtcgacaccatcttgctcaagccgaccacgcttaccaaagccaat
gtcgacctgctggtgacggacggcttctacacgcaagcgcagatcagcagcaaataa
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