Collimonas pratensis: CPter91_1380
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Entry
CPter91_1380 CDS
T04306
Name
(GenBank) putative uracil DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
cpra
Collimonas pratensis
Pathway
cpra03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
cpra00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
CPter91_1380
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cpra03400
]
CPter91_1380
Enzymes [BR:
cpra01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
CPter91_1380
DNA repair and recombination proteins [BR:
cpra03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
CPter91_1380
Prokaryotic type
CPter91_1380
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
AMP03760
UniProt:
A0A127Q103
LinkDB
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Position
1427356..1428144
Genome browser
AA seq
262 aa
AA seq
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MTDFLPASIRDALRGVHPSWLAILEAGLRAVAQANPAYLQDLAVADYLPTEGRMFAAFTQ
PLQAVRYVLVGEGPYPRAASATGVCFMDGAVGSLWSEKGLSKQVNRATSLRNFMKMLLVA
DGQLAIESTTGDAMSGVAHKAQLPGSPAIQLLADLQDNMVGQGFLLLNASLVFRADVPPV
KDAKGWQPFMQAVLQGLADAAEERGAALPTLVLWGKIAEQLNAYAVTARFPKAVAEHPYN
LSFIGNAGMQALFGPMQLLKRA
NT seq
789 nt
NT seq
+upstream
nt +downstream
nt
atgactgattttctacctgcttcaatccgtgacgctttacgaggcgttcacccctcctgg
ctcgccatcctggaagccggcctgcgcgccgtggcgcaagccaatccagcttatttgcag
gatctggccgtagccgattacctgccgaccgaaggccgcatgttcgccgccttcacccag
ccgctgcaggcggtgcgctatgtgctggtaggcgaggggccttatccgcgcgctgccagc
gccaccggcgtatgtttcatggatggtgcggtcggctctttgtggtcggagaagggtttg
tcgaagcaggtcaatcgcgccacctcgctgcgcaacttcatgaagatgttgctggtggcc
gatggccagttggccatcgaaagcaccaccggcgatgccatgtccggcgtcgcccacaaa
gcacagctgcccggctcgccggcgatccagctgctggcggacttgcaggacaatatggtg
gggcagggcttcctgctgctgaatgcgtcgctggtgttccgtgccgacgtgccgccggtg
aaggacgccaaaggctggcagcccttcatgcaggcggtgctgcagggcttggcggatgct
gcggaagagcgtggcgcggcgctgccgacgctggtgctgtgggggaagatcgccgagcag
ctgaatgcctatgcggtcactgcgcgttttccgaaggcggtcgccgagcatccttataat
ctcagctttatcggcaacgccggcatgcaagccctgttcgggccgatgcagttgttgaag
cgcgcgtag
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