Collimonas pratensis: CPter91_1405
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Entry
CPter91_1405 CDS
T04306
Name
(GenBank) bacterial regulatory helix-turn-helix s, AraC family protein
KO
K21826
AraC family transcriptional regulator, glycine betaine-responsive activator
Organism
cpra
Collimonas pratensis
Brite
KEGG Orthology (KO) [BR:
cpra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cpra03000
]
CPter91_1405
Transcription factors [BR:
cpra03000
]
Prokaryotic type
Helix-turn-helix
AraC family
CPter91_1405
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
HTH_18
DJ-1_PfpI
HTH_AraC
Motif
Other DBs
NCBI-ProteinID:
AMP03785
UniProt:
A0A127Q1U1
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All DBs
Position
complement(1450432..1451448)
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AA seq
338 aa
AA seq
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MSKSTSTSFTHFAFMPLNNFTMLAFSNAIEVLRMANYLEGKPLYRWSIISPEGGAVSASN
GLAVTTMRADQCPAADAVFVCGGTQIASAINSATLDLLRNLAKQGKTLGSLCTGAFALAE
AGLLDGYTCATHWENLSSIKRSYPAIAFAPDLFVVDRDRITCTGGIAPLDMMLNLISGQV
GKTTIAAIADQFILEHVRDHKDQQRVPLTVRMTSARPAMVEVVSLMEANIEEPLSLDELA
QLSNSSPRQLQRMFKEHMGMSPTHYYLTLRLRKARELLRQTDMSILSITVACGFQSACHF
SKTYREIFSVAPSTERRQQAAVPAALLATQNQQPAAFV
NT seq
1017 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaaaagcacttccacttccttcacccactttgctttcatgccgctcaacaacttc
acgatgctggcattttcaaatgccatcgaagtgctgagaatggcgaattatctggaagga
aaaccgctctaccgctggtccatcatcagtcccgaaggcggcgccgtgagcgccagcaac
ggcctcgccgtcaccaccatgcgcgccgaccagtgcccggccgccgatgccgtcttcgtc
tgcggcggtacgcaaatcgccagcgccatcaacagcgccaccctggacttgctaagaaac
ctggcaaaacaagggaagaccttgggcagcctgtgcaccggcgctttcgcgctggccgaa
gccggactgctggacggctatacctgcgccacgcactgggaaaacctgtcgtcgataaag
cgctcatatcccgcaattgccttcgcgcctgacctgttcgtagtcgaccgcgaccgcatc
acctgcaccggcggcattgcgccgctggacatgatgctgaacctgatttccggacaagtc
ggaaaaaccacgattgccgcgattgccgaccagttcatcctggaacatgtccgcgaccac
aaagaccagcaacgggtgccgctgacggtacgcatgacctccgcccgcccggccatggtg
gaagtggtgtcgctgatggaagccaacatagaagaaccgctgtcgctagacgaactggcg
caactgtccaactcgtcgccacgccagctgcagcgcatgttcaaggagcacatgggcatg
tcgcccacccactactacctgaccctgcgcctgcgcaaggccagggaactgctgcgccag
accgacatgtcgatcctcagcatcaccgtcgcatgcggcttccagtcagcctgccacttc
agcaagacctaccgcgaaatcttcagcgtcgcccccagcaccgaacgccgccagcaagca
gcagtaccggcagcactgctcgcaacgcaaaaccagcagcccgccgcattcgtataa
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