Collimonas pratensis: CPter91_1901
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Entry
CPter91_1901 CDS
T04306
Symbol
fecI
Name
(GenBank) RNA polymerase sigma factor, sigma-70 family protein
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
cpra
Collimonas pratensis
Pathway
cpra02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
cpra00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
CPter91_1901 (fecI)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cpra03021
]
CPter91_1901 (fecI)
Transcription machinery [BR:
cpra03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
CPter91_1901 (fecI)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
Sigma70_ECF
HTH_23
HTH_20
HTH_11
HTH_24
GerE
PhyR_sigma-like
Xre-like-HTH
HTH_28
HTH_40
HTH_Tnp_ISL3
HTH_38
HTH_7
HTH_Mga
HTH_17
TnsD
Motif
Other DBs
NCBI-ProteinID:
AMP04274
UniProt:
A0A127Q2L0
LinkDB
All DBs
Position
1928409..1928909
Genome browser
AA seq
166 aa
AA seq
DB search
MPKVEATSIQSLYVEHHNWLVGWLRRRLGNIDHAADIAQDTFVRVLLKSAIEVIEEPRAY
LTVIAKGLVANAHRRDALERTYLETLAMVPEELAPSQEYRAMLLETLFEIDAMLDQLPAK
ARSTFLLSQLEGLTYAEIAERLDISVRTVKRHMVLGFEQCLMFSLP
NT seq
501 nt
NT seq
+upstream
nt +downstream
nt
atgcccaaggttgaggctacatcgatacagtccttatatgttgagcaccataactggttg
gtaggatggctgcgccggcgcctcggcaatatcgaccacgccgcggatatcgcccaggat
acgtttgtacgggtactgctgaaatcggcgatcgaagtgatcgaagagccgcgcgcctat
ctgacggtcatcgccaagggcctggttgccaacgcccaccggcgcgatgccttggaacgc
acttacctggaaacgctggcgatggtgccggaagagctggcgccctcgcaggaataccgt
gcgatgctgctggaaaccttgtttgaaatcgacgccatgctggaccagctgccggccaag
gcgcgcagcaccttcctgctgtcgcagctggaaggcctgacctatgccgagattgccgag
cgcctcgatatttccgtgcgtaccgtcaagcgccacatggtgctgggctttgaacaatgc
ctgatgttttccctgccatga
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