Collimonas pratensis: CPter91_2001
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Entry
CPter91_2001 CDS
T04306
Name
(GenBank) bacterial regulatory helix-turn-helix, lysR family protein
KO
K19338
LysR family transcriptional regulator, nitrogen assimilation regulatory protein
Organism
cpra
Collimonas pratensis
Brite
KEGG Orthology (KO) [BR:
cpra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cpra03000
]
CPter91_2001
Transcription factors [BR:
cpra03000
]
Prokaryotic type
Helix-turn-helix
LysR family
CPter91_2001
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Paralog
Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
HTH_30
Motif
Other DBs
NCBI-ProteinID:
AMP04373
UniProt:
A0A127Q2X0
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Position
2026472..2027410
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AA seq
312 aa
AA seq
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MELRQLRYFVAIVDHGSLSRAARVLHIAQPALTQQIKQLEDELSAQLLHRSAQGVIATDA
GKIFYEHAQAILKQVIDARSAVAQSTDKPTGTVALGIPQSVSGILALPLLTAMRARYPDI
SLQLTEELTGNLIEQLKTGRINLAVLFDDGQLGSFAVTPLAEEEMMFITRSGSQYATARR
SVTFARAAKARLILPGMQHGVRPRIESVARAAGIVLENVIEISSVTIMKSAILADIGATI
LPVAPLLPEIRRGEMTAYSISGEKLSRTLALCASRNIPLTTAAAAVERLVLEVTDELCRS
GEWLHARILARP
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atggagttgcgtcaactgcgctattttgtcgccatcgtcgatcatggatcgctgtcgcgt
gcggcgcgcgtcttgcacatcgcccagccggcgctgacccagcagatcaagcagctggaa
gacgagttgtcggcgcagctcttgcaccgttcggcgcagggcgtgatcgctaccgatgcc
ggcaagattttctacgaacatgcgcaagccatcctcaagcaggtgattgacgccaggtcg
gccgttgcgcaatccaccgacaagccgaccggcacggttgcattaggtatcccgcaaagc
gtttccggcatcctggcgctgcctttgctgacggcgatgcgcgcccgctatccggatatc
tcgctgcagctgacggaagaactgaccggcaacctgatcgagcagctcaagaccggccgt
atcaacctggcggtgctgttcgacgacggccagttaggctcgtttgccgtgacgccgctg
gcggaagaggaaatgatgttcatcacgcgcagcggttcgcagtatgcgaccgcgcgccgt
tcggtgacctttgctcgcgcggccaaggcccggctgattctgccgggcatgcagcacggc
gtccgtccgcgcatcgaaagcgtcgctcgggcggccggcatcgtattggaaaacgtcatc
gagatcagttcggtgaccatcatgaagtcggccatcctggccgacatcggcgccaccatc
ttgccggtggcgcccctgctgccggagatccggcgtggcgaaatgacggcctactcgatc
agcggcgaaaaattgtcgcgcacgctggcgctgtgcgcttccaggaatattccgctgacc
accgcggcggcggcggtcgaacggctggtgctggaggtgaccgatgaactgtgccgcagt
ggcgagtggctgcatgcaaggatcctggcgcggccttga
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