Collimonas pratensis: CPter91_2320
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Entry
CPter91_2320 CDS
T04306
Symbol
rimO
Name
(GenBank) ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
cpra
Collimonas pratensis
Brite
KEGG Orthology (KO) [BR:
cpra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cpra03009
]
CPter91_2320 (rimO)
Enzymes [BR:
cpra01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
CPter91_2320 (rimO)
Ribosome biogenesis [BR:
cpra03009
]
Prokaryotic type
ribosomal protein modification factors
CPter91_2320 (rimO)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Radical_SAM
TRAM_2
UPF0004
TRAM
YajR_YAM
CLP1_P
DUF2249
Motif
Other DBs
NCBI-ProteinID:
AMP04683
UniProt:
A0A127Q3S6
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All DBs
Position
2365154..2366536
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AA seq
460 aa
AA seq
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MSNVISAAPAALVPAPKVGFVSLGCPKALVDSEQILTQLRAEGYETAKSYEGADLVIVNT
CGFIDAAVQESLDAIGEALSENGKVIVTGCLGAKKDADGDDIIQKIHPKVLEVTGPHAVG
EVMFAVHKHLPKPHAPFLDLLPPQGIKLTPKHFAYLKISEGCNHRCSFCIIPSMRGDLVS
RPIADIMMEAENLFKAGVKELLVISQDTSAYGVDVKFRMGFWNGKPVKTHMTQLVTALGE
IAAQYGAWVRLHYVYPYPHVDQIIPLMAEGKILPYLDVPLQHAHPDVLKRMKRPASGEKN
IERIQAWRAMCPDLTIRSTFIAGFPGETEAEFEYLLDFLKEAEIDRLGCFAYSPVEGATA
NALDNPVPEELREERRGRVMQLQEEISKKRLQAKVGKTMRVLIDSVDRSGGVGRSSADAP
EIDGVVYVKPPYEPHKKLVVGEFVDVTITASDAHDLWAAA
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
atgtccaatgttatttccgcggcgccagctgcactagtcccagcccctaaagtcggtttc
gtctcccttggttgccctaaggcactggtcgactccgagcagatcctgacccagctgcgt
gcggaaggttatgaaactgccaagtcttatgaaggcgctgacctcgtcatcgtcaacacc
tgcggctttatcgacgccgccgtgcaagagtcgctggacgccatcggcgaagcgctgagc
gaaaacggcaaggtcatcgtcaccggctgcctgggcgccaagaaagacgccgacggcgac
gacatcatccagaaaatccacccgaaagtgctggaagtgaccggcccgcatgccgtcggc
gaagtcatgttcgcggtccacaagcatctgccgaagccgcatgcgcctttcctcgacctg
ctgccgccgcaaggcatcaagctcacgcccaagcatttcgcctacctgaagatctcggaa
ggctgtaaccatcgttgcagtttctgcatcatcccctcgatgcgtggcgacctggtgtcg
cgcccgatcgccgacatcatgatggaagcagagaacctgttcaaggccggcgtcaaggaa
ctgctggtgatttcgcaagacaccagcgcctatggcgtcgacgtcaagttccgcatgggt
ttctggaacggcaagccggtaaagacccacatgacgcagctggtgacggcattgggcgag
atcgctgcccagtatggcgcctgggtccgcctgcactacgtttatccgtatccgcacgtc
gaccagatcatcccgctgatggcggaaggcaagatcctgccatacctggacgtgccgctg
cagcacgcccatccggacgtcttgaagcgcatgaagcgcccagccagcggcgaaaagaat
atcgaacgcatccaggcttggcgcgccatgtgtccggacctgaccatccgctccaccttt
atcgccggcttcccgggcgagaccgaagccgaattcgaatacctgctggacttcctcaag
gaagctgaaatcgatcgcctcggctgctttgcctactcgccggtggaaggcgcgactgcc
aacgccctggataatccggtgccggaagaattgcgcgaagagcgccgcggccgcgtcatg
cagttgcaggaagaaatttccaagaagcgcctgcaagccaaggtcggcaagaccatgcgt
gtgctgatcgactcggtcgaccgcagcggcggcgtcggccgttccagcgccgatgcgccg
gaaatcgacggcgtggtgtacgtcaagccgccgtacgaaccgcacaaaaaactggtagtc
ggcgagtttgtcgatgtcaccatcaccgcttcagacgcgcacgatttgtgggccgctgca
tga
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