Collimonas pratensis: CPter91_2420
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Entry
CPter91_2420 CDS
T04306
Name
(GenBank) putative collagen triple helix repeat
Organism
cpra
Collimonas pratensis
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen_mid
Baculo_PEP_C
Motif
Other DBs
NCBI-ProteinID:
AMP04779
UniProt:
A0A127Q406
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All DBs
Position
2452580..2454022
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AA seq
480 aa
AA seq
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MSGTGAALGAIGDTVINNVPLLSTQSKGGLTTVVDNGSGIVSTLGAGVTNGLGQLGSNPN
ALGTTVGSVGGAVTQTGNVVQGVGQVVSGLGTGPLAPLAAVTTPVGNLVTQVGTAVSGLG
APVTTLLTTGPVQQITQTVGQAIVPLTSTVTTLTQTVGNATGLNQPVNGLLVALGGTVNG
IGKTLTGANVPGVSSLGGVVSDLGGTVAGLGTNALVGTGQPLLGNKTGGLLQPLDNVLTG
VVGGLGSAGGAGGAGNILAPVTGLLGGLTGAAGGAGGAGNILAPVTGLLGGLTGAAGGAG
GAGNILAPVKGLLGGLTGATGGAGGAGNILSPVTGLVGSLTGAAGGAGGAGNILSPVTGL
VGSLTGAAGGAGGAGNILAPVTGLVGSLTGAAGGAGGAGGAGGAGNILAPVTGLVAGVTG
AAGGAAGGAGGAGGAGILAPVVNLVAGLTGGKGTTGGTGNTDALAPVTGLLNGLLGGGKK
NT seq
1443 nt
NT seq
+upstream
nt +downstream
nt
gtgtccggtacaggtgcagcactgggtgcgataggcgatacggtgatcaacaacgtgccg
ctgctctcgacccaatccaagggcggcttgacaaccgtggtcgataacggcagcggcatt
gtcagcacgctgggcgccggcgtcacaaatggattgggccagctcggcagcaatcctaat
gcgcttggcactaccgtcggcagcgttggcggcgccgtcacgcaaaccggcaatgtggtg
cagggtgtcggccaggtggtttccgggctgggaaccggaccattggcgccattggctgcc
gtgactacgccggtgggcaatctggtaacccaggtgggaacggctgtttccggactggga
gcgccggtgacgaccttgctgactaccggcccggtacagcagatcacgcaaaccgtcggc
caggcaatcgttccattgaccagcacggtaacgaccttgacccagaccgtcggtaacgca
accggcctgaaccagcctgtgaacggcttgctggtggcgctgggcggaaccgtcaatggt
atcggcaaaacgctgaccggagcgaatgtccctggcgtgagcagcctgggcggagtagtc
agcgatcttggcggcaccgtggcgggccttggcaccaatgcattggtcggtaccgggcag
cctttgctgggcaacaagaccggcggtctgttgcaacctttggataacgtcttgaccggg
gtggtcggcgggctgggaagtgcgggcggcgctggcggtgcgggtaacatcctggctccg
gtgactggcctgctgggcggcttgactggtgcggctggcggcgctggcggtgctggcaac
atcctggctccggtgactggcctgctgggtggcttgaccggcgcggctggcggtgctggc
ggtgcgggtaacatcctggccccggtgaagggcctgctgggcggcttgaccggtgcaact
ggcggcgctggcggtgcgggtaacatcctgtctccggtgactggcctggtaggcagcttg
accggtgcggccggcggcgcaggcggtgctggcaatatcctgtctccggtgactggcctg
gtgggcagcttgactggtgcagccggcggcgctggtggtgctggcaacatcctggctccg
gtgactggcctggtaggtagcctgactggtgcagccggcggcgcaggcggtgcaggcggt
gcaggcggtgcaggcaacatcctggccccggtaaccggcctggtagcgggcgtgacaggt
gccgcaggtggcgcggccggcggtgccggtggtgctggcggcgcgggcatactggctcca
gtggtgaatctggtggcaggcttgaccggcggcaaaggaaccaccggtggcacaggcaac
accgatgccctggctccggtgactggcttgctgaacggcttgctgggaggcggcaagaag
taa
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