Collimonas pratensis: CPter91_2476
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Entry
CPter91_2476 CDS
T04306
Symbol
rumA
Name
(GenBank) 23S rRNA (uracil-5-)-methyltransferase RumA
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
cpra
Collimonas pratensis
Brite
KEGG Orthology (KO) [BR:
cpra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cpra03009
]
CPter91_2476 (rumA)
Enzymes [BR:
cpra01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
CPter91_2476 (rumA)
Ribosome biogenesis [BR:
cpra03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
CPter91_2476 (rumA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
RrnaAD
Methyltransf_31
Methyltransf_25
MTS
TRM5-TYW2_MTfase
Methyltransf_15
PCMT
Methyltransf_23
TRAM
Methyltransf_11
DOT1
Cons_hypoth95
TPMT
Motif
Other DBs
NCBI-ProteinID:
AMP04835
UniProt:
A0A127Q4U5
LinkDB
All DBs
Position
2504388..2505701
Genome browser
AA seq
437 aa
AA seq
DB search
MDARGIGHLQNEDGSQGKVIFVEGALPGERVSFLSYRKKAKWEAASMTALHKESVLRVKP
HCAVFGICGGCAMQHLEPSAQVAIKQRVLEDNLWHIGKVKAESMLRPIYGPTWGYRYRAR
ISVRNVPKKGGVLVGFHERKSSFITDMKECEILPANVSAMLVPLRHLIASLSLIDHIPQI
ELAVGEGPQGKVTALVLRIMAALSADDEVKLKAFADEYQVNWWLQTAGPDSAYPFYPADG
ELYYTLPEFGVRMPFKPTDFTQVNHQINRVLVARALRLLDMQPQDRVADLFCGLGNFTLP
LATQVREVVGIEGSQALINRAGENAAVNQLADKTTLYCRNLFEATAEDFIALGKFERMLI
DPPRDGAAAVCEAIVGLAAIDKSFMPQRIVYVSCNPSTLARDAGLLTAGGYRLSQAGVVN
MFPHTAHVESIAVFDLA
NT seq
1314 nt
NT seq
+upstream
nt +downstream
nt
atggatgcgcgcgggatcggccatttgcaaaatgaagacggcagccagggcaaggtgatc
tttgtcgaaggcgccttgccgggcgagcgcgtcagtttcctgtcgtatcgcaagaaggcc
aaatgggaagcggccagcatgaccgctttgcataaagagtcggtgctgcgggtcaagccg
cattgcgccgtgttcggcatttgcggcggctgtgccatgcagcacttggagccatcggcg
caagtggcgattaagcagcgcgtgctggaagataatttgtggcatatcggcaaggtcaag
gcagaatccatgctgcgcccgatctacgggccgacctggggctaccgctatcgtgcccgt
atttcggtgcgcaatgtgcctaaaaagggcggggtgctggtcggcttccatgagcggaaa
tcttccttcatcaccgacatgaaagaatgcgagatcctgccggcgaacgtctcggcgatg
ctggtgccgttgcgccatctgatcgcttcgctaagcctgatcgaccatattccgcagatc
gaactggcggtcggcgagggcccgcaaggcaaggtgacggcgctggtgttgcgcatcatg
gcggccttgagcgccgatgacgaagtcaagctgaaggcgtttgcggatgaataccaggtc
aactggtggttgcagactgcagggccggacagcgcctatcccttctatccggcggacggc
gagctgtactacaccttgccggaattcggcgtgcggatgccgttcaagccgaccgatttc
acgcaagtgaaccatcagatcaaccgggtgctggtggcgcgcgccttgcgcttgctggat
atgcagccgcaagaccgcgtagccgacctgttctgcggcctgggaaatttcaccttgccg
ctggctacgcaggtacgcgaagtggtcggcatcgaaggcagccaggccttgatcaaccgt
gccggcgaaaatgccgcagtcaatcaactggccgacaagaccacgctctactgccgtaac
ctgttcgaggcgactgccgaggatttcattgctttgggtaaattcgagcgcatgctgatc
gatccgccgcgcgatggcgcagccgctgtttgcgaagcgattgtcgggctggcggcgatt
gacaagagcttcatgccgcagcggatcgtctacgtctcgtgcaatccctcaaccctggcg
cgcgacgccggcttgctgaccgcgggcggctatcgcctgagccaggccggggtggtgaac
atgttcccgcatactgcgcacgtggagtcgattgcagtatttgacctggcgtaa
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